/* * Licensed to the Apache Software Foundation (ASF) under one or more * contributor license agreements. See the NOTICE file distributed with * this work for additional information regarding copyright ownership. * The ASF licenses this file to You under the Apache License, Version 2.0 * (the "License"); you may not use this file except in compliance with * the License. You may obtain a copy of the License at * * http://www.apache.org/licenses/LICENSE-2.0 * * Unless required by applicable law or agreed to in writing, software * distributed under the License is distributed on an "AS IS" BASIS, * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. * See the License for the specific language governing permissions and * limitations under the License. */ package org.apache.commons.math3.ml.clustering; import java.util.Collection; import java.util.List; import org.apache.commons.math3.exception.ConvergenceException; import org.apache.commons.math3.exception.MathIllegalArgumentException; import org.apache.commons.math3.ml.distance.DistanceMeasure; /** * Base class for clustering algorithms. * * @param <T> the type of points that can be clustered * @since 3.2 */ public abstract class Clusterer<T extends Clusterable> { /** The distance measure to use. */ private DistanceMeasure measure; /** * Build a new clusterer with the given {@link DistanceMeasure}. * * @param measure the distance measure to use */ protected Clusterer(final DistanceMeasure measure) { this.measure = measure; } /** * Perform a cluster analysis on the given set of {@link Clusterable} instances. * * @param points the set of {@link Clusterable} instances * @return a {@link List} of clusters * @throws MathIllegalArgumentException if points are null or the number of * data points is not compatible with this clusterer * @throws ConvergenceException if the algorithm has not yet converged after * the maximum number of iterations has been exceeded */ public abstract List<? extends Cluster<T>> cluster(Collection<T> points) throws MathIllegalArgumentException, ConvergenceException; /** * Returns the {@link DistanceMeasure} instance used by this clusterer. * * @return the distance measure */ public DistanceMeasure getDistanceMeasure() { return measure; } /** * Calculates the distance between two {@link Clusterable} instances * with the configured {@link DistanceMeasure}. * * @param p1 the first clusterable * @param p2 the second clusterable * @return the distance between the two clusterables */ protected double distance(final Clusterable p1, final Clusterable p2) { return measure.compute(p1.getPoint(), p2.getPoint()); } }