/* * The MIT License (MIT) * * Copyright (c) 2007-2015 Broad Institute * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal * in the Software without restriction, including without limitation the rights * to use, copy, modify, merge, publish, distribute, sublicense, and/or sell * copies of the Software, and to permit persons to whom the Software is * furnished to do so, subject to the following conditions: * * The above copyright notice and this permission notice shall be included in * all copies or substantial portions of the Software. * * * THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, * FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, * OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN * THE SOFTWARE. */ package org.broad.igv.util; import junit.framework.TestCase; import htsjdk.samtools.seekablestream.SeekableHTTPStream; import org.broad.igv.util.stream.IGVSeekableHTTPStream; import org.broad.igv.util.stream.SeekableServiceStream; import org.junit.Test; import java.net.URL; /** * @author jrobinso * @date Jul 28, 2010 */ public class SeekableServiceStreamTest extends TestCase { /** * Test a file at some random position using the webservice, and compare results obtained to the standard * http stream. * * @throws Exception */ @Test public void testRead() throws Exception { String tdfFile = "https://data.broadinstitute.org/igvdata/annotations/hg18/conservation/omega.12mer.tdf"; HttpUtils.getInstance().updateProxySettings(); IGVSeekableHTTPStream hs = new IGVSeekableHTTPStream(new URL(tdfFile)); final int position = 100; hs.seek(position); final int range = 1000; byte[] expectedBytes = new byte[range]; hs.read(expectedBytes, 0, expectedBytes.length); SeekableServiceStream sss = new SeekableServiceStream(new URL(tdfFile)); sss.seek(position); byte[] bytes = new byte[range]; sss.read(bytes, 0, bytes.length); for (int i = 0; i < expectedBytes.length; i++) { assertEquals(expectedBytes[i], bytes[i]); } } }