/*
 * The MIT License (MIT)
 *
 * Copyright (c) 2007-2015 Broad Institute
 *
 * Permission is hereby granted, free of charge, to any person obtaining a copy
 * of this software and associated documentation files (the "Software"), to deal
 * in the Software without restriction, including without limitation the rights
 * to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
 * copies of the Software, and to permit persons to whom the Software is
 * furnished to do so, subject to the following conditions:
 *
 * The above copyright notice and this permission notice shall be included in
 * all copies or substantial portions of the Software.
 *
 *
 * THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
 * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
 * FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
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package org.broad.igv.data.seg;

import org.broad.igv.AbstractHeadlessTest;
import org.broad.igv.feature.genome.Genome;
import org.broad.igv.util.ResourceLocator;
import org.broad.igv.util.TestUtils;
import org.junit.Test;

import java.io.IOException;

/**
 * @author jrobinso
 * @date Oct 13, 2010
 */
public class FreqDataTest extends AbstractHeadlessTest {

    @Test
    public void test() throws IOException {

        Genome genome = TestUtils.loadGenome();

        String segfile = TestUtils.DATA_DIR + "seg/canFam2_hg18.seg";


        SegmentedDataSet sd = new SegmentedAsciiDataSet(new ResourceLocator(segfile), genome);

        FreqData fd = new FreqData(sd, genome);
    }
}