/*
 * The MIT License (MIT)
 *
 * Copyright (c) 2007-2015 Broad Institute
 *
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 * of this software and associated documentation files (the "Software"), to deal
 * in the Software without restriction, including without limitation the rights
 * to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
 * copies of the Software, and to permit persons to whom the Software is
 * furnished to do so, subject to the following conditions:
 *
 * The above copyright notice and this permission notice shall be included in
 * all copies or substantial portions of the Software.
 *
 *
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 * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
 * FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
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package org.broad.igv.feature;

import org.broad.igv.feature.genome.Genome;
import htsjdk.tribble.AsciiFeatureCodec;
import htsjdk.tribble.Feature;
import htsjdk.tribble.FeatureCodec;

/**
 * FeatureParser which reads features using a codec.
 * Intended as a bridge between FeatureParser interface
 * and FeatureSource interface. Hope to remove the FeatureParser
 * interface eventually, making this no longer necessary.
 * <p/>
 * <p/>
 * <p/>
 * User: jacob
 * Date: 2012/01/26
 */
public class FeatureCodecParser extends AbstractFeatureParser {
    private AsciiFeatureCodec codec;

    public FeatureCodecParser(AsciiFeatureCodec codec, Genome genome) {
        this.codec = codec;
    }

    @Override
    protected Feature parseLine(String nextLine) {
        return codec.decode(nextLine);
    }
}