/* * The MIT License (MIT) * * Copyright (c) 2007-2015 Broad Institute * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal * in the Software without restriction, including without limitation the rights * to use, copy, modify, merge, publish, distribute, sublicense, and/or sell * copies of the Software, and to permit persons to whom the Software is * furnished to do so, subject to the following conditions: * * The above copyright notice and this permission notice shall be included in * all copies or substantial portions of the Software. * * * THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, * FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, * OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN * THE SOFTWARE. */ package org.broad.igv.ui; import org.apache.log4j.Logger; import org.broad.igv.ui.panel.MainPanel; import org.broad.igv.ui.panel.TrackPanel; import org.broad.igv.ui.util.ApplicationStatusBar; import javax.swing.*; import javax.swing.plaf.basic.BasicBorders; import java.awt.*; /** * The content pane for the IGV main window. */ public class IGVContentPane extends JPanel { private static Logger log = Logger.getLogger(IGVContentPane.class); private JPanel commandBarPanel; private IGVCommandBar igvCommandBar; private MainPanel mainPanel; private ApplicationStatusBar statusBar; private IGV igv; /** * Creates new form IGV */ public IGVContentPane(IGV igv) { setOpaque(true); // Required by Swing this.igv = igv; // Create components setLayout(new BorderLayout()); commandBarPanel = new JPanel(); BoxLayout layout = new BoxLayout(commandBarPanel, BoxLayout.PAGE_AXIS); commandBarPanel.setLayout(layout); add(commandBarPanel, BorderLayout.NORTH); igvCommandBar = new IGVCommandBar(); igvCommandBar.setMinimumSize(new Dimension(250, 33)); igvCommandBar.setBorder(new BasicBorders.MenuBarBorder(Color.GRAY, Color.GRAY)); igvCommandBar.setAlignmentX(Component.BOTTOM_ALIGNMENT); commandBarPanel.add(igvCommandBar); mainPanel = new MainPanel(igv); add(mainPanel, BorderLayout.CENTER); statusBar = new ApplicationStatusBar(); statusBar.setDebugGraphicsOptions(javax.swing.DebugGraphics.NONE_OPTION); add(statusBar, BorderLayout.SOUTH); } public void addCommandBar(JComponent component) { component.setBorder(new BasicBorders.MenuBarBorder(Color.GRAY, Color.GRAY)); component.setAlignmentX(Component.BOTTOM_ALIGNMENT); commandBarPanel.add(component); commandBarPanel.invalidate(); } @Override public Dimension getPreferredSize() { return UIConstants.preferredSize; } public void revalidateTrackPanels() { for (TrackPanel tp : mainPanel.getTrackPanels()) { tp.getScrollPane().getDataPanel().revalidate(); } } /** * Reset the default status message, which is the number of tracks loaded. */ public void resetStatusMessage() { statusBar.setMessage("" + igv.getVisibleTrackCount() + " tracks loaded"); } public MainPanel getMainPanel() { return mainPanel; } public IGVCommandBar getCommandBar() { return igvCommandBar; } public ApplicationStatusBar getStatusBar() { return statusBar; } }