/* * The MIT License (MIT) * * Copyright (c) 2007-2015 Broad Institute * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal * in the Software without restriction, including without limitation the rights * to use, copy, modify, merge, publish, distribute, sublicense, and/or sell * copies of the Software, and to permit persons to whom the Software is * furnished to do so, subject to the following conditions: * * The above copyright notice and this permission notice shall be included in * all copies or substantial portions of the Software. * * * THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, * FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, * OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN * THE SOFTWARE. */ package org.broad.igv.charts; /** * @author Jim Robinson * @date 10/31/11 */ public class XYDataPoint { private int idx; private double x; private double y; private int mutationCount; // <= TODO make this some generic attribute, we've lost the generality of this class private String description; public XYDataPoint(int idx, double x, double y, int mutationCount, String description) { this.idx = idx; this.x = x; this.y = y; this.mutationCount = mutationCount; this.description = description; } public double getX() { return x; } public double getY() { return y; } public int getMutationCount() { return mutationCount; } public String getDescription() { return description; } /** * Test if the point represented by (px, py) is with tolerance of this point. * * * @param px * @param py * @param toleranceX * @param toleranceY * @return */ public boolean contains(double px, double py, double toleranceX, double toleranceY) { return px > x - toleranceX && px < x + toleranceX && py > y - toleranceY && py < y + toleranceY; } public int getIdx() { return idx; } }