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 * Copyright (c) 2007-2015 Broad Institute
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 * of this software and associated documentation files (the "Software"), to deal
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package org.broad.igv.feature.genome;

import org.broad.igv.util.TestUtils;
import org.junit.Test;

import static org.junit.Assert.assertEquals;

/**
 * @author jrobinso
 * @date Apr 28, 2011
 */
public class GenomeDescriptorTest {

    /**
     * Test the patch to fix legacy .genome files with incorrect sequence paths
     */

    @Test
    public void testSequencePathFix() {

        // Test for a directory that does exist
        String seqLocation = TestUtils.DATA_DIR;
        GenomeDescriptor desc = new GenomeZipDescriptor("", false, "", "", "", "", "", seqLocation, false, null, null,
                false, false, false, null);
        assertEquals(TestUtils.DATA_DIR, desc.getSequenceLocation());

        // Test for a directory that does not exist
        seqLocation = "/foo/bar";
        desc = new GenomeZipDescriptor("", false, "", "", "", "", "", seqLocation, false, null, null, false, false, false, null);
        assertEquals("/foo/bar", desc.getSequenceLocation());
    }
}