/* * The MIT License (MIT) * * Copyright (c) 2007-2015 Broad Institute * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal * in the Software without restriction, including without limitation the rights * to use, copy, modify, merge, publish, distribute, sublicense, and/or sell * copies of the Software, and to permit persons to whom the Software is * furnished to do so, subject to the following conditions: * * The above copyright notice and this permission notice shall be included in * all copies or substantial portions of the Software. * * * THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, * FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, * OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN * THE SOFTWARE. */ package org.broad.igv.data; //~--- non-JDK imports -------------------------------------------------------- import org.broad.igv.feature.LocusScore; import java.util.ArrayList; import java.util.Collection; import java.util.List; /** * Represents a chunk of data over a fixed window span (default == 1) * * @version 1.0 * @created 13-Nov-2007 13:11:15 */ public class SummaryTile { private int startLocation; List<LocusScore> summaryScores; public SummaryTile() { summaryScores = new ArrayList(1000); } public SummaryTile(List<LocusScore> summaryScores) { this.summaryScores = summaryScores; } public void addScore(LocusScore score) { summaryScores.add(score); } public void addAllScores(Collection<? extends LocusScore> scores) { summaryScores.addAll(scores); } public List<LocusScore> getScores() { return summaryScores; } public int getSize() { return summaryScores.size(); } public boolean isEmpty() { return summaryScores.isEmpty(); } }