/* * The MIT License (MIT) * * Copyright (c) 2007-2015 Broad Institute * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal * in the Software without restriction, including without limitation the rights * to use, copy, modify, merge, publish, distribute, sublicense, and/or sell * copies of the Software, and to permit persons to whom the Software is * furnished to do so, subject to the following conditions: * * The above copyright notice and this permission notice shall be included in * all copies or substantial portions of the Software. * * * THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, * FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, * OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN * THE SOFTWARE. */ package org.broad.igv.charts; import org.broad.igv.util.collections.DoubleArrayList; import java.util.ArrayList; import java.util.List; /** * @author Jim Robinson * @date 10/26/11 */ public class XYSeries { String name; List<XYDataPoint> dataPoints; public XYSeries(String name) { this.name = name; dataPoints = new ArrayList<XYDataPoint>(500); } public void add(int idx, double x, double y, int mutationCount, String description) { dataPoints.add(new XYDataPoint(idx, x, y, mutationCount, description)); } public int getSize() { return dataPoints.size(); } public String getName() { return name; } public List<XYDataPoint> getDataPoints() { return dataPoints; } public XYDataPoint getDataPoint(double x, double y, double toleranceX, double toleranceY) { for (XYDataPoint dp : dataPoints) { if (dp.contains(x, y, toleranceX, toleranceY)) { return dp; } } return null; } }