/* * The MIT License (MIT) * * Copyright (c) 2007-2015 Broad Institute * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal * in the Software without restriction, including without limitation the rights * to use, copy, modify, merge, publish, distribute, sublicense, and/or sell * copies of the Software, and to permit persons to whom the Software is * furnished to do so, subject to the following conditions: * * The above copyright notice and this permission notice shall be included in * all copies or substantial portions of the Software. * * * THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, * FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, * OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN * THE SOFTWARE. */ /* * To change this template, choose Tools | Templates * and open the template in the editor. */ package org.broad.igv.track; import java.io.BufferedWriter; import java.io.FileWriter; import java.io.IOException; import java.io.PrintWriter; /** * @author jrobinso */ public class TestUtils { public static void main(String[] args) throws IOException { createFeatureTestFile(); } public static void createFeatureTestFile() throws IOException { String chr = "chr1"; long chrLength = 560000; long featureLength = 1; PrintWriter pw = new PrintWriter(new BufferedWriter(new FileWriter("data/featureTest.txt"))); long featureStart = 0; long featureEnd = featureStart + featureLength; int n = 0; while (featureEnd <= chrLength) { pw.println(chr + "\t" + featureStart + "\t" + featureEnd + "\t" + ("feature_" + n)); featureStart += 2 * featureLength; featureEnd = featureStart + featureLength; } pw.close(); } }