package dr.inferencexml.operators;
import dr.inference.operators.MCMCOperator;
import dr.inference.operators.OperatorSchedule;
import dr.inference.operators.SimpleOperatorSchedule;
import dr.xml.*;
import java.util.logging.Logger;
/**
*
*/
public class SimpleOperatorScheduleParser extends AbstractXMLObjectParser {
public static final String OPERATOR_SCHEDULE = "operators";
public static final String SEQUENTIAL = "sequential";
public static final String OPTIMIZATION_SCHEDULE = "optimizationSchedule";
public String getParserName() {
return OPERATOR_SCHEDULE;
}
public Object parseXMLObject(XMLObject xo) throws XMLParseException {
SimpleOperatorSchedule schedule = new SimpleOperatorSchedule();
if (xo.hasAttribute(SEQUENTIAL)) {
schedule.setSequential(xo.getBooleanAttribute(SEQUENTIAL));
}
if (xo.hasAttribute(OPTIMIZATION_SCHEDULE)) {
String type = xo.getStringAttribute(OPTIMIZATION_SCHEDULE);
Logger.getLogger("dr.inference").info("Optimization Schedule: " + type);
if (type.equals(OperatorSchedule.LOG_STRING))
schedule.setOptimizationSchedule(OperatorSchedule.LOG_SCHEDULE);
else if (type.equals(OperatorSchedule.SQRT_STRING))
schedule.setOptimizationSchedule(OperatorSchedule.SQRT_SCHEDULE);
else if (!type.equals(OperatorSchedule.DEFAULT_STRING))
throw new RuntimeException("Unsupported optimization schedule");
}
for (int i = 0; i < xo.getChildCount(); i++) {
Object child = xo.getChild(i);
if (child instanceof MCMCOperator) {
schedule.addOperator((MCMCOperator) child);
}
}
return schedule;
}
//************************************************************************
// AbstractXMLObjectParser implementation
//************************************************************************
public XMLSyntaxRule[] getSyntaxRules() {
return rules;
}
private final XMLSyntaxRule[] rules = {
AttributeRule.newBooleanRule(SEQUENTIAL, true),
new ElementRule(MCMCOperator.class, 1, Integer.MAX_VALUE),
AttributeRule.newStringRule(OPTIMIZATION_SCHEDULE, true)
};
public String getParserDescription() {
return "A simple operator scheduler";
}
public Class getReturnType() {
return SimpleOperatorSchedule.class;
}
}