/* * ExponentialParameterPrior.java * * Copyright (C) 2002-2006 Alexei Drummond and Andrew Rambaut * * This file is part of BEAST. * See the NOTICE file distributed with this work for additional * information regarding copyright ownership and licensing. * * BEAST is free software; you can redistribute it and/or modify * it under the terms of the GNU Lesser General Public License as * published by the Free Software Foundation; either version 2 * of the License, or (at your option) any later version. * * BEAST is distributed in the hope that it will be useful, * but WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the * GNU Lesser General Public License for more details. * * You should have received a copy of the GNU Lesser General Public * License along with BEAST; if not, write to the * Free Software Foundation, Inc., 51 Franklin St, Fifth Floor, * Boston, MA 02110-1301 USA */ //package dr.inference.prior; // //import dr.inference.model.Parameter; //import org.w3c.dom.Document; //import org.w3c.dom.Element; /** * This prior provides an exponential expectation on a single parameter * @author Alexei Drummond * @version $Id: ExponentialParameterPrior.java,v 1.5 2005/05/24 20:26:00 rambaut Exp $ */ //public class ExponentialParameterPrior extends AbstractParameterPrior { // // /** // * the mean of the exponential distribution. // */ // double mean; // // public ExponentialParameterPrior(Parameter parameter, double mean) { // this(parameter, -1, mean); // } // // public ExponentialParameterPrior(Parameter parameter, int dimension, double mean) { // this.mean = mean; // setParameter(parameter); // setDimension(dimension); // } // // public double getLogPriorComponent(double value) { // return - value / mean; // } // // public Element createElement(Document d) { // Element e = d.createElement("exponentialPrior"); // e.setAttribute("mean", mean + ""); // return e; // } // // public final double getMean() { return mean; } // // public String toString() { // return "Exponential(" + formatter.format(mean).trim() + ")"; // } // // public String toHTML() { // return "<font color=\"#FF00FF\">Exponential(" + formatter.format(mean).trim() + ")</font>"; // } //}