package dr.evomodelxml.operators;
import dr.evomodel.operators.AlloppHybPopSizesScale;
import dr.evomodel.speciation.AlloppSpeciesBindings;
import dr.evomodel.speciation.AlloppSpeciesNetworkModel;
import dr.inference.operators.MCMCOperator;
import dr.inferencexml.operators.ScaleOperatorParser;
import dr.xml.*;
/**
* Created with IntelliJ IDEA.
* User: Graham
* Date: 03/08/12
*/
public class AlloppHybPopSizesScaleParser extends AbstractXMLObjectParser {
public static final String HYB_POP_SIZES_SCALE = "hybPopSizesScaleOperator";
public String getParserName() {
return HYB_POP_SIZES_SCALE;
}
@Override
public Object parseXMLObject(XMLObject xo) throws XMLParseException {
AlloppSpeciesBindings apsp = (AlloppSpeciesBindings) xo.getChild(AlloppSpeciesBindings.class);
AlloppSpeciesNetworkModel apspnet = (AlloppSpeciesNetworkModel) xo.getChild(AlloppSpeciesNetworkModel.class);
final double weight = xo.getDoubleAttribute(MCMCOperator.WEIGHT);
final double scalingfactor = xo.getDoubleAttribute(ScaleOperatorParser.SCALE_FACTOR);
return new AlloppHybPopSizesScale(apspnet, apsp, scalingfactor, weight);
}
@Override
public XMLSyntaxRule[] getSyntaxRules() {
return new XMLSyntaxRule[]{
AttributeRule.newDoubleRule(MCMCOperator.WEIGHT),
AttributeRule.newDoubleRule(ScaleOperatorParser.SCALE_FACTOR),
new ElementRule(AlloppSpeciesBindings.class),
new ElementRule(AlloppSpeciesNetworkModel.class)
};
}
@Override
public String getParserDescription() {
return "Operator which scales the population size of a newly formed hybrid.";
}
@Override
public Class getReturnType() {
return AlloppHybPopSizesScale.class;
}
}