package com.compomics.util.gui.parameters.identification_parameters;
import com.compomics.util.experiment.identification.protein_sequences.SequenceFactory;
import com.compomics.util.gui.renderers.AlignedListCellRenderer;
import com.compomics.util.preferences.LastSelectedFolder;
import com.compomics.util.preferences.ProteinInferencePreferences;
import com.compomics.util.protein_sequences_manager.gui.SequenceDbDetailsDialog;
import java.awt.Dialog;
import java.awt.Image;
import java.io.File;
import java.io.IOException;
import java.sql.SQLException;
import javax.swing.JOptionPane;
import javax.swing.SwingConstants;
/**
* Dialog for the edition of the protein inference settings.
*
* @author Marc Vaudel
* @author Harald Barsnes
*/
public class ProteinInferenceSettingsDialog extends javax.swing.JDialog {
/**
* The parent frame.
*/
private java.awt.Frame parentFrame;
/**
* The normal dialog icon.
*/
private Image normalIcon;
/**
* The waiting dialog icon.
*/
private Image waitingIcon;
/**
* The last selected folder to use.
*/
private final LastSelectedFolder lastSelectedFolder;
/**
* Boolean indicating whether the user canceled the editing.
*/
private boolean canceled = false;
/**
* Boolean indicating whether the settings can be edited by the user.
*/
private boolean editable;
/**
* Creates a new ProteinInferenceSettingsDialog with a frame as owner.
*
* @param parentFrame a parent frame
* @param proteinInferencePreferences the protein inference settings to
* display
* @param normalIcon the normal dialog icon
* @param waitingIcon the waiting dialog icon
* @param lastSelectedFolder the last selected folder to use
* @param editable boolean indicating whether the settings can be edited by
* the user
*/
public ProteinInferenceSettingsDialog(java.awt.Frame parentFrame, ProteinInferencePreferences proteinInferencePreferences,
Image normalIcon, Image waitingIcon, LastSelectedFolder lastSelectedFolder, boolean editable) {
super(parentFrame, true);
this.parentFrame = parentFrame;
this.normalIcon = normalIcon;
this.waitingIcon = waitingIcon;
this.lastSelectedFolder = lastSelectedFolder;
this.editable = editable;
initComponents();
setUpGui();
populateGUI(proteinInferencePreferences);
setLocationRelativeTo(parentFrame);
setVisible(true);
}
/**
* Creates a new ProteinInferenceSettingsDialog with a dialog as owner.
*
* @param owner the dialog owner
* @param parentFrame a parent frame
* @param proteinInferencePreferences the protein inference settings to
* display
* @param normalIcon the normal dialog icon
* @param waitingIcon the waiting dialog icon
* @param lastSelectedFolder the last selected folder to use
* @param editable boolean indicating whether the settings can be edited by
* the user
*/
public ProteinInferenceSettingsDialog(Dialog owner, java.awt.Frame parentFrame, ProteinInferencePreferences proteinInferencePreferences,
Image normalIcon, Image waitingIcon, LastSelectedFolder lastSelectedFolder, boolean editable) {
super(owner, true);
this.parentFrame = parentFrame;
this.normalIcon = normalIcon;
this.waitingIcon = waitingIcon;
this.lastSelectedFolder = lastSelectedFolder;
this.editable = editable;
initComponents();
setUpGui();
populateGUI(proteinInferencePreferences);
setLocationRelativeTo(owner);
setVisible(true);
}
/**
* Set up the GUI.
*/
private void setUpGui() {
if (!editable) {
editDatabaseDetailsButton.setText("View");
}
simplifyGroupsCmb.setEnabled(editable);
simplifyScoreCmb.setEnabled(editable);
simplifyEnzymaticityCmb.setEnabled(editable);
simplifyEvidenceCmb.setEnabled(editable);
simplifyCharacterizationCmb.setEnabled(editable);
simplifyGroupsCmb.setRenderer(new AlignedListCellRenderer(SwingConstants.CENTER));
simplifyScoreCmb.setRenderer(new AlignedListCellRenderer(SwingConstants.CENTER));
simplifyEnzymaticityCmb.setRenderer(new AlignedListCellRenderer(SwingConstants.CENTER));
simplifyEvidenceCmb.setRenderer(new AlignedListCellRenderer(SwingConstants.CENTER));
simplifyCharacterizationCmb.setRenderer(new AlignedListCellRenderer(SwingConstants.CENTER));
}
/**
* Fills the GUI with the given settings.
*
* @param proteinInferencePreferences the protein inference settings to
* display
*/
private void populateGUI(ProteinInferencePreferences proteinInferencePreferences) {
if (proteinInferencePreferences.getProteinSequenceDatabase() != null) {
databaseSettingsTxt.setText(proteinInferencePreferences.getProteinSequenceDatabase().getAbsolutePath());
okButton.setEnabled(true);
}
if (proteinInferencePreferences.getSimplifyGroups()) {
simplifyGroupsCmb.setSelectedIndex(0);
} else {
simplifyGroupsCmb.setSelectedIndex(1);
simplifyScoreCmb.setEnabled(false);
simplifyEnzymaticityCmb.setEnabled(false);
simplifyEvidenceCmb.setEnabled(false);
simplifyCharacterizationCmb.setEnabled(false);
}
if (proteinInferencePreferences.getSimplifyGroupsScore()) {
simplifyScoreCmb.setSelectedIndex(0);
} else {
simplifyScoreCmb.setSelectedIndex(1);
}
if (proteinInferencePreferences.getSimplifyGroupsEnzymaticity()) {
simplifyEnzymaticityCmb.setSelectedIndex(0);
} else {
simplifyEnzymaticityCmb.setSelectedIndex(1);
}
if (proteinInferencePreferences.getSimplifyGroupsEvidence()) {
simplifyEvidenceCmb.setSelectedIndex(0);
} else {
simplifyEvidenceCmb.setSelectedIndex(1);
}
if (proteinInferencePreferences.getSimplifyGroupsUncharacterized()) {
simplifyCharacterizationCmb.setSelectedIndex(0);
} else {
simplifyCharacterizationCmb.setSelectedIndex(1);
}
}
/**
* Returns the protein inference preferences.
*
* @return the protein inference preferences
*/
public ProteinInferencePreferences getProteinInferencePreferences() {
ProteinInferencePreferences proteinInferencePreferences = new ProteinInferencePreferences();
proteinInferencePreferences.setProteinSequenceDatabase(new File(databaseSettingsTxt.getText()));
proteinInferencePreferences.setSimplifyGroups(simplifyGroupsCmb.getSelectedIndex() == 0);
proteinInferencePreferences.setSimplifyGroupsScore(simplifyScoreCmb.getSelectedIndex() == 0);
proteinInferencePreferences.setSimplifyGroupsEvidence(simplifyEvidenceCmb.getSelectedIndex() == 0);
proteinInferencePreferences.setSimplifyGroupsEnzymaticity(simplifyEnzymaticityCmb.getSelectedIndex() == 0);
proteinInferencePreferences.setSimplifyGroupsUncharacterized(simplifyCharacterizationCmb.getSelectedIndex() == 0);
return proteinInferencePreferences;
}
/**
* Indicates whether the user canceled the editing.
*
* @return a boolean indicating whether the user canceled the editing
*/
public boolean isCanceled() {
return canceled;
}
/**
* This method is called from within the constructor to initialize the form.
* WARNING: Do NOT modify this code. The content of this method is always
* regenerated by the Form Editor.
*/
@SuppressWarnings("unchecked")
// <editor-fold defaultstate="collapsed" desc="Generated Code">//GEN-BEGIN:initComponents
private void initComponents() {
backgroundPanel = new javax.swing.JPanel();
cancelButton = new javax.swing.JButton();
okButton = new javax.swing.JButton();
dataBasePanelSettings = new javax.swing.JPanel();
databaseSettingsLbl = new javax.swing.JLabel();
databaseSettingsTxt = new javax.swing.JTextField();
editDatabaseDetailsButton = new javax.swing.JButton();
proteinGroupPanel = new javax.swing.JPanel();
simplifyGroupsLbl = new javax.swing.JLabel();
simplifyScoreLbl = new javax.swing.JLabel();
simplifyEnzymaticityLbl = new javax.swing.JLabel();
simplifyEvidenceLbl = new javax.swing.JLabel();
simplifyCharacterizationLbl = new javax.swing.JLabel();
simplifyGroupsCmb = new javax.swing.JComboBox();
simplifyScoreCmb = new javax.swing.JComboBox();
simplifyEnzymaticityCmb = new javax.swing.JComboBox();
simplifyEvidenceCmb = new javax.swing.JComboBox();
simplifyCharacterizationCmb = new javax.swing.JComboBox();
setDefaultCloseOperation(javax.swing.WindowConstants.DISPOSE_ON_CLOSE);
setTitle("Protein Inference Settings");
addWindowListener(new java.awt.event.WindowAdapter() {
public void windowClosing(java.awt.event.WindowEvent evt) {
formWindowClosing(evt);
}
});
backgroundPanel.setBackground(new java.awt.Color(230, 230, 230));
cancelButton.setText("Cancel");
cancelButton.addActionListener(new java.awt.event.ActionListener() {
public void actionPerformed(java.awt.event.ActionEvent evt) {
cancelButtonActionPerformed(evt);
}
});
okButton.setText("OK");
okButton.setEnabled(false);
okButton.addActionListener(new java.awt.event.ActionListener() {
public void actionPerformed(java.awt.event.ActionEvent evt) {
okButtonActionPerformed(evt);
}
});
dataBasePanelSettings.setBorder(javax.swing.BorderFactory.createTitledBorder("Database"));
dataBasePanelSettings.setOpaque(false);
databaseSettingsLbl.setText("Database (FASTA)");
databaseSettingsTxt.setEditable(false);
editDatabaseDetailsButton.setText("Edit");
editDatabaseDetailsButton.addActionListener(new java.awt.event.ActionListener() {
public void actionPerformed(java.awt.event.ActionEvent evt) {
editDatabaseDetailsButtonActionPerformed(evt);
}
});
javax.swing.GroupLayout dataBasePanelSettingsLayout = new javax.swing.GroupLayout(dataBasePanelSettings);
dataBasePanelSettings.setLayout(dataBasePanelSettingsLayout);
dataBasePanelSettingsLayout.setHorizontalGroup(
dataBasePanelSettingsLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING)
.addGroup(dataBasePanelSettingsLayout.createSequentialGroup()
.addContainerGap()
.addComponent(databaseSettingsLbl, javax.swing.GroupLayout.PREFERRED_SIZE, 116, javax.swing.GroupLayout.PREFERRED_SIZE)
.addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED)
.addComponent(databaseSettingsTxt)
.addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED)
.addComponent(editDatabaseDetailsButton, javax.swing.GroupLayout.PREFERRED_SIZE, 80, javax.swing.GroupLayout.PREFERRED_SIZE)
.addContainerGap())
);
dataBasePanelSettingsLayout.setVerticalGroup(
dataBasePanelSettingsLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING)
.addGroup(dataBasePanelSettingsLayout.createSequentialGroup()
.addContainerGap()
.addGroup(dataBasePanelSettingsLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.BASELINE)
.addComponent(databaseSettingsLbl)
.addComponent(editDatabaseDetailsButton)
.addComponent(databaseSettingsTxt, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE))
.addContainerGap(javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE))
);
proteinGroupPanel.setBorder(javax.swing.BorderFactory.createTitledBorder("Protein Groups Simplification"));
proteinGroupPanel.setOpaque(false);
simplifyGroupsLbl.setText("Simplify Protein Groups");
simplifyScoreLbl.setText("- Based on Score");
simplifyEnzymaticityLbl.setText("- Based on Enzymaticity");
simplifyEvidenceLbl.setText("- Based on UniProt Evidence Level");
simplifyCharacterizationLbl.setText("- Based on Protein Characterization");
simplifyGroupsCmb.setModel(new javax.swing.DefaultComboBoxModel(new String[] { "Yes", "No" }));
simplifyGroupsCmb.addActionListener(new java.awt.event.ActionListener() {
public void actionPerformed(java.awt.event.ActionEvent evt) {
simplifyGroupsCmbActionPerformed(evt);
}
});
simplifyScoreCmb.setModel(new javax.swing.DefaultComboBoxModel(new String[] { "Yes", "No" }));
simplifyEnzymaticityCmb.setModel(new javax.swing.DefaultComboBoxModel(new String[] { "Yes", "No" }));
simplifyEvidenceCmb.setModel(new javax.swing.DefaultComboBoxModel(new String[] { "Yes", "No" }));
simplifyCharacterizationCmb.setModel(new javax.swing.DefaultComboBoxModel(new String[] { "Yes", "No" }));
javax.swing.GroupLayout proteinGroupPanelLayout = new javax.swing.GroupLayout(proteinGroupPanel);
proteinGroupPanel.setLayout(proteinGroupPanelLayout);
proteinGroupPanelLayout.setHorizontalGroup(
proteinGroupPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING)
.addGroup(proteinGroupPanelLayout.createSequentialGroup()
.addContainerGap()
.addGroup(proteinGroupPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING)
.addComponent(simplifyGroupsLbl)
.addGroup(proteinGroupPanelLayout.createSequentialGroup()
.addGap(10, 10, 10)
.addGroup(proteinGroupPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING)
.addComponent(simplifyScoreLbl)
.addComponent(simplifyEnzymaticityLbl)
.addComponent(simplifyEvidenceLbl)
.addComponent(simplifyCharacterizationLbl))))
.addGap(61, 61, 61)
.addGroup(proteinGroupPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING)
.addComponent(simplifyScoreCmb, 0, 296, Short.MAX_VALUE)
.addComponent(simplifyEnzymaticityCmb, javax.swing.GroupLayout.Alignment.TRAILING, 0, javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE)
.addComponent(simplifyEvidenceCmb, javax.swing.GroupLayout.Alignment.TRAILING, 0, javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE)
.addComponent(simplifyCharacterizationCmb, javax.swing.GroupLayout.Alignment.TRAILING, 0, javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE)
.addComponent(simplifyGroupsCmb, 0, javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE))
.addContainerGap())
);
proteinGroupPanelLayout.setVerticalGroup(
proteinGroupPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING)
.addGroup(proteinGroupPanelLayout.createSequentialGroup()
.addContainerGap()
.addGroup(proteinGroupPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.BASELINE)
.addComponent(simplifyGroupsLbl)
.addComponent(simplifyGroupsCmb, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE))
.addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED)
.addGroup(proteinGroupPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.BASELINE)
.addComponent(simplifyScoreLbl)
.addComponent(simplifyScoreCmb, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE))
.addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED)
.addGroup(proteinGroupPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.BASELINE)
.addComponent(simplifyEnzymaticityLbl)
.addComponent(simplifyEnzymaticityCmb, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE))
.addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED)
.addGroup(proteinGroupPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.BASELINE)
.addComponent(simplifyEvidenceLbl)
.addComponent(simplifyEvidenceCmb, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE))
.addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED)
.addGroup(proteinGroupPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.BASELINE)
.addComponent(simplifyCharacterizationLbl)
.addComponent(simplifyCharacterizationCmb, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE))
.addContainerGap(javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE))
);
javax.swing.GroupLayout backgroundPanelLayout = new javax.swing.GroupLayout(backgroundPanel);
backgroundPanel.setLayout(backgroundPanelLayout);
backgroundPanelLayout.setHorizontalGroup(
backgroundPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING)
.addGroup(javax.swing.GroupLayout.Alignment.TRAILING, backgroundPanelLayout.createSequentialGroup()
.addContainerGap()
.addGroup(backgroundPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.TRAILING)
.addComponent(proteinGroupPanel, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE)
.addGroup(javax.swing.GroupLayout.Alignment.LEADING, backgroundPanelLayout.createSequentialGroup()
.addGap(0, 0, Short.MAX_VALUE)
.addComponent(okButton, javax.swing.GroupLayout.PREFERRED_SIZE, 65, javax.swing.GroupLayout.PREFERRED_SIZE)
.addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED)
.addComponent(cancelButton))
.addComponent(dataBasePanelSettings, javax.swing.GroupLayout.Alignment.LEADING, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE))
.addContainerGap())
);
backgroundPanelLayout.setVerticalGroup(
backgroundPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING)
.addGroup(javax.swing.GroupLayout.Alignment.TRAILING, backgroundPanelLayout.createSequentialGroup()
.addContainerGap()
.addComponent(dataBasePanelSettings, javax.swing.GroupLayout.PREFERRED_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.PREFERRED_SIZE)
.addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED)
.addComponent(proteinGroupPanel, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE)
.addPreferredGap(javax.swing.LayoutStyle.ComponentPlacement.RELATED)
.addGroup(backgroundPanelLayout.createParallelGroup(javax.swing.GroupLayout.Alignment.BASELINE)
.addComponent(cancelButton)
.addComponent(okButton))
.addContainerGap())
);
javax.swing.GroupLayout layout = new javax.swing.GroupLayout(getContentPane());
getContentPane().setLayout(layout);
layout.setHorizontalGroup(
layout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING)
.addComponent(backgroundPanel, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE)
);
layout.setVerticalGroup(
layout.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING)
.addComponent(backgroundPanel, javax.swing.GroupLayout.DEFAULT_SIZE, javax.swing.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE)
);
pack();
}// </editor-fold>//GEN-END:initComponents
/**
* Close the dialog.
*
* @param evt
*/
private void okButtonActionPerformed(java.awt.event.ActionEvent evt) {//GEN-FIRST:event_okButtonActionPerformed
dispose();
}//GEN-LAST:event_okButtonActionPerformed
/**
* Cancel the dialog.
*
* @param evt
*/
private void cancelButtonActionPerformed(java.awt.event.ActionEvent evt) {//GEN-FIRST:event_cancelButtonActionPerformed
canceled = true;
dispose();
}//GEN-LAST:event_cancelButtonActionPerformed
/**
* Edit the database.
*
* @param evt
*/
private void editDatabaseDetailsButtonActionPerformed(java.awt.event.ActionEvent evt) {//GEN-FIRST:event_editDatabaseDetailsButtonActionPerformed
SequenceFactory sequenceFactory = SequenceFactory.getInstance();
// clear the factory
if (databaseSettingsTxt.getText().trim().length() == 0) {
try {
sequenceFactory.clearFactory();
} catch (IOException e) {
e.printStackTrace();
JOptionPane.showMessageDialog(this, "Failed to clear the sequence factory.", "File Error", JOptionPane.ERROR_MESSAGE);
} catch (SQLException e) {
e.printStackTrace();
JOptionPane.showMessageDialog(this, "Failed to clear the sequence factory.", "File Error", JOptionPane.ERROR_MESSAGE);
}
}
SequenceDbDetailsDialog sequenceDbDetailsDialog = new SequenceDbDetailsDialog(parentFrame, lastSelectedFolder, editable, normalIcon, waitingIcon);
boolean success = sequenceDbDetailsDialog.selectDB(true);
if (success) {
sequenceDbDetailsDialog.setVisible(true);
okButton.setEnabled(true);
}
if (sequenceFactory.getCurrentFastaFile() != null) {
databaseSettingsTxt.setText(sequenceFactory.getCurrentFastaFile().getAbsolutePath());
}
}//GEN-LAST:event_editDatabaseDetailsButtonActionPerformed
/**
* Cancel the dialog.
*
* @param evt
*/
private void formWindowClosing(java.awt.event.WindowEvent evt) {//GEN-FIRST:event_formWindowClosing
canceled = true;
}//GEN-LAST:event_formWindowClosing
/**
* Enable or disable the detailed options.
*
* @param evt
*/
private void simplifyGroupsCmbActionPerformed(java.awt.event.ActionEvent evt) {//GEN-FIRST:event_simplifyGroupsCmbActionPerformed
simplifyScoreCmb.setEnabled(editable && simplifyGroupsCmb.getSelectedIndex() == 0);
simplifyEnzymaticityCmb.setEnabled(editable && simplifyGroupsCmb.getSelectedIndex() == 0);
simplifyEvidenceCmb.setEnabled(editable && simplifyGroupsCmb.getSelectedIndex() == 0);
simplifyCharacterizationCmb.setEnabled(editable && simplifyGroupsCmb.getSelectedIndex() == 0);
}//GEN-LAST:event_simplifyGroupsCmbActionPerformed
// Variables declaration - do not modify//GEN-BEGIN:variables
private javax.swing.JPanel backgroundPanel;
private javax.swing.JButton cancelButton;
private javax.swing.JPanel dataBasePanelSettings;
private javax.swing.JLabel databaseSettingsLbl;
private javax.swing.JTextField databaseSettingsTxt;
private javax.swing.JButton editDatabaseDetailsButton;
private javax.swing.JButton okButton;
private javax.swing.JPanel proteinGroupPanel;
private javax.swing.JComboBox simplifyCharacterizationCmb;
private javax.swing.JLabel simplifyCharacterizationLbl;
private javax.swing.JComboBox simplifyEnzymaticityCmb;
private javax.swing.JLabel simplifyEnzymaticityLbl;
private javax.swing.JComboBox simplifyEvidenceCmb;
private javax.swing.JLabel simplifyEvidenceLbl;
private javax.swing.JComboBox simplifyGroupsCmb;
private javax.swing.JLabel simplifyGroupsLbl;
private javax.swing.JComboBox simplifyScoreCmb;
private javax.swing.JLabel simplifyScoreLbl;
// End of variables declaration//GEN-END:variables
}