package com.compomics.util.experiment.biology.aminoacids;
import com.compomics.util.experiment.biology.AminoAcid;
import com.compomics.util.experiment.biology.Atom;
import com.compomics.util.experiment.biology.AtomChain;
import com.compomics.util.experiment.biology.AtomImpl;
/**
* Serine.
*
* @author Marc Vaudel
*/
public class Serine extends AminoAcid {
/**
* Serial number for backward compatibility.
*/
static final long serialVersionUID = -2201410868329421240L;
/**
* Constructor.
*/
public Serine() {
singleLetterCode = "S";
threeLetterCode = "Ser";
name = "Serine";
averageMass = 87.0773;
monoisotopicMass = 87.032028;
monoisotopicAtomChain = new AtomChain();
monoisotopicAtomChain.append(new AtomImpl(Atom.C, 0), 3);
monoisotopicAtomChain.append(new AtomImpl(Atom.H, 0), 5);
monoisotopicAtomChain.append(new AtomImpl(Atom.N, 0), 1);
monoisotopicAtomChain.append(new AtomImpl(Atom.O, 0), 2);
subAminoAcidsWithoutCombination = new char[]{'S'};
subAminoAcidsWithCombination = subAminoAcidsWithoutCombination;
aminoAcidCombinations = new char[]{'X'};
standardGeneticCode = new String[] {"AGT", "AGC"};
}
@Override
public boolean iscombination() {
return false;
}
}