package com.compomics.util.experiment.biology.aminoacids;
import com.compomics.util.experiment.biology.AminoAcid;
import com.compomics.util.experiment.biology.Atom;
import com.compomics.util.experiment.biology.AtomChain;
import com.compomics.util.experiment.biology.AtomImpl;
/**
* Aspartic Acid.
*
* @author Marc Vaudel
*/
public class AsparticAcid extends AminoAcid {
/**
* Serial number for backward compatibility.
*/
static final long serialVersionUID = -8410332876209882538L;
/**
* Constructor.
*/
public AsparticAcid() {
singleLetterCode = "D";
threeLetterCode = "Asp";
name = "Aspartic Acid";
averageMass = 115.0874;
monoisotopicMass = 115.026943;
monoisotopicAtomChain = new AtomChain();
monoisotopicAtomChain.append(new AtomImpl(Atom.C, 0), 4);
monoisotopicAtomChain.append(new AtomImpl(Atom.H, 0), 5);
monoisotopicAtomChain.append(new AtomImpl(Atom.N, 0), 1);
monoisotopicAtomChain.append(new AtomImpl(Atom.O, 0), 3);
subAminoAcidsWithoutCombination = new char[]{'D'};
subAminoAcidsWithCombination = subAminoAcidsWithoutCombination;
aminoAcidCombinations = new char[]{'B', 'X'};
standardGeneticCode = new String[] {"GAT", "GAC"};
}
@Override
public boolean iscombination() {
return false;
}
}