/*
* #%L
* gitools-utils
* %%
* Copyright (C) 2013 Universitat Pompeu Fabra - Biomedical Genomics group
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of the
* License, or (at your option) any later version.
*
* This program is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU General Public License for more details.
*
* You should have received a copy of the GNU General Public
* License along with this program. If not, see
* <http://www.gnu.org/licenses/gpl-3.0.html>.
* #L%
*/
package org.gitools.utils.aggregation;
import org.gitools.api.analysis.IAggregator;
import static com.google.common.base.Predicates.notNull;
import static com.google.common.collect.Iterables.filter;
import static com.google.common.collect.Iterables.isEmpty;
import static com.google.common.collect.Lists.newArrayList;
import static com.google.common.primitives.Doubles.toArray;
abstract class AbstractAggregator implements IAggregator {
private String name;
protected AbstractAggregator(String name) {
this.name = name;
}
@Override
public Double aggregate(Iterable<Double> values) {
Iterable<Double> noNullValues = filter(values, notNull());
if (isEmpty(noNullValues)) {
return null;
}
return aggregateNoNulls(toArray(newArrayList(noNullValues)));
}
@Deprecated
protected Double aggregateNoNulls(double[] values) {
return null;
}
public String toString() {
return name;
}
}