/*
* #%L
* gitools-ui-app
* %%
* Copyright (C) 2013 Universitat Pompeu Fabra - Biomedical Genomics group
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of the
* License, or (at your option) any later version.
*
* This program is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU General Public License for more details.
*
* You should have received a copy of the GNU General Public
* License along with this program. If not, see
* <http://www.gnu.org/licenses/gpl-3.0.html>.
* #L%
*/
package org.gitools.ui.app.actions.edit;
import org.apache.commons.lang.StringUtils;
import org.gitools.api.matrix.view.IMatrixView;
import org.gitools.heatmap.Heatmap;
import org.gitools.heatmap.HeatmapDimension;
import org.gitools.heatmap.header.ColoredLabel;
import org.gitools.heatmap.header.HeatmapColoredLabelsHeader;
import org.gitools.heatmap.header.HeatmapHeader;
import org.gitools.heatmap.header.HierarchicalClusterHeatmapHeader;
import org.gitools.ui.core.Application;
import org.gitools.ui.core.HeatmapPosition;
import org.gitools.ui.core.actions.AbstractAction;
import org.gitools.ui.core.actions.dynamicactions.IHeatmapHeaderAction;
import java.awt.event.ActionEvent;
import java.util.ArrayList;
public class SelectLabelHeaderAction extends AbstractAction implements IHeatmapHeaderAction {
private String annotationValue;
private HeatmapColoredLabelsHeader coloredHeader;
public SelectLabelHeaderAction() {
super("<html><i>Add</i> label header to selection</html>");
}
@Override
public boolean isEnabledByModel(Object model) {
return model instanceof Heatmap || model instanceof IMatrixView;
}
@Override
public void actionPerformed(ActionEvent e) {
if (annotationValue == null) {
return;
}
HeatmapDimension dimension = coloredHeader.getHeatmapDimension();
ArrayList<String> addToSelected = new ArrayList();
for (String identifier : dimension) {
String value = coloredHeader.getColoredLabel(identifier).getValue();
if (StringUtils.equals(value, annotationValue)) {
addToSelected.add(identifier);
}
}
if (addToSelected.size() > 0) {
int selectedBefore = dimension.getSelected().size();
dimension.getSelected().addAll(addToSelected);
int selectedDifference = Math.abs(selectedBefore - dimension.getSelected().size());
Application.get().showNotification("Selected " + selectedDifference + " new " + dimension.getId().getLabel() + "s");
} else {
Application.get().showNotification("Added none to selected");
}
}
@Override
public void onConfigure(HeatmapHeader header, HeatmapPosition position) {
if(header instanceof HierarchicalClusterHeatmapHeader) {
header = ((HierarchicalClusterHeatmapHeader) header).getInteractionLevelHeader();
}
setEnabled(header instanceof HeatmapColoredLabelsHeader);
if (header instanceof HeatmapColoredLabelsHeader) {
coloredHeader = (HeatmapColoredLabelsHeader) header;
annotationValue = position.getHeaderAnnotation();
ColoredLabel coloredLabel = coloredHeader.getAssignedColoredLabel(annotationValue);
String label = coloredHeaderLabel(coloredHeader, coloredLabel);
setName("<html><i>Select all</i> <b>" + label + "</b> labels</html>");
}
}
}