/* * #%L * gitools-ui-app * %% * Copyright (C) 2013 Universitat Pompeu Fabra - Biomedical Genomics group * %% * This program is free software: you can redistribute it and/or modify * it under the terms of the GNU General Public License as * published by the Free Software Foundation, either version 3 of the * License, or (at your option) any later version. * * This program is distributed in the hope that it will be useful, * but WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the * GNU General Public License for more details. * * You should have received a copy of the GNU General Public * License along with this program. If not, see * <http://www.gnu.org/licenses/gpl-3.0.html>. * #L% */ package org.gitools.ui.app.wizard; import org.gitools.api.analysis.IProgressMonitor; import org.gitools.datasources.modules.importer.ModuleCategory; import org.gitools.datasources.modules.importer.ModulesImporter; import org.gitools.datasources.modules.importer.Organism; import org.gitools.datasources.modules.importer.Version; import org.gitools.ui.core.Application; import org.gitools.ui.core.pages.common.FilteredListPage; import org.gitools.ui.platform.progress.JobRunnable; import org.gitools.ui.platform.progress.JobThread; import javax.swing.*; public class ModulesOrganismPage extends FilteredListPage { private final ModulesImporter importer; private ModuleCategory modCategory; private Version version; private boolean loaded; public ModulesOrganismPage(ModulesImporter importer) { this.importer = importer; this.loaded = false; setTitle("Select organism"); } @Override public void updateControls() { super.updateControls(); if (!loaded || modCategory != importer.getModuleCategory() || version != importer.getVersion()) { JobThread.execute(Application.get(), new JobRunnable() { @Override public void run(IProgressMonitor monitor) { try { monitor.begin("Getting available organisms ...", 1); modCategory = importer.getModuleCategory(); version = importer.getVersion(); final Organism[] organisms = importer.getOrganisms(); SwingUtilities.invokeLater(new Runnable() { @Override public void run() { setListData(organisms); for (Organism o : organisms) if (o.getName().equals("homo sapiens")) { setSelectedValue(o); } loaded = true; } }); } catch (Exception ex) { monitor.exception(ex); } } }); } } @Override public void updateModel() { importer.setOrganism(getOrganism()); } private Organism getOrganism() { return (Organism) getSelectedValue(); } }