/*
* #%L
* gitools-core
* %%
* Copyright (C) 2013 Universitat Pompeu Fabra - Biomedical Genomics group
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of the
* License, or (at your option) any later version.
*
* This program is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU General Public License for more details.
*
* You should have received a copy of the GNU General Public
* License along with this program. If not, see
* <http://www.gnu.org/licenses/gpl-3.0.html>.
* #L%
*/
package org.gitools.analysis.groupcomparison.format;
import org.gitools.analysis.groupcomparison.GroupComparisonAnalysis;
import org.gitools.api.PersistenceException;
import org.gitools.api.analysis.IProgressMonitor;
import org.gitools.api.persistence.FileFormat;
import org.gitools.api.resource.IResourceLocator;
import org.gitools.resource.AbstractXmlFormat;
import javax.enterprise.context.ApplicationScoped;
@ApplicationScoped
public class GroupComparisonAnalysisFormat extends AbstractXmlFormat<GroupComparisonAnalysis> {
public static final String EXTENSION = "comparison";
public static final FileFormat FILE_FORMAT = new FileFormat("Overlapping analysis", EXTENSION, true, false, true);
public GroupComparisonAnalysisFormat() {
super(EXTENSION, GroupComparisonAnalysis.class);
}
@Override
protected void writeResource(IResourceLocator resourceLocator, GroupComparisonAnalysis resource, IProgressMonitor monitor) throws PersistenceException {
//TODO Find a better solution for this error
resource.getData().get();
resource.getResults().get();
super.writeResource(resourceLocator, resource, monitor);
}
}