IMatrixPosition.java example

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gitools-master
/*
 * #%L
 * gitools-core
 * %%
 * Copyright (C) 2013 Universitat Pompeu Fabra - Biomedical Genomics group
 * %%
 * This program is free software: you can redistribute it and/or modify
 * it under the terms of the GNU General Public License as
 * published by the Free Software Foundation, either version 3 of the 
 * License, or (at your option) any later version.
 * 
 * This program is distributed in the hope that it will be useful,
 * but WITHOUT ANY WARRANTY; without even the implied warranty of
 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 * GNU General Public License for more details.
 * 
 * You should have received a copy of the GNU General Public 
 * License along with this program.  If not, see
 * <http://www.gnu.org/licenses/gpl-3.0.html>.
 * #L%
 */
package org.gitools.api.matrix;

public interface IMatrixPosition {

    IMatrix getMatrix();

    String get(IMatrixDimension dimension);

    String get(MatrixDimensionKey dimension);

    IMatrixPosition set(IMatrixDimension dimension, String identifier);

    IMatrixPosition set(MatrixDimensionKey dimension, String identifier);

    IMatrixPosition set(String... identifiers);

    IMatrixIterable<String> iterate(IMatrixDimension dimension);

    <T> IMatrixIterable<T> iterate(ILayerAdapter<T> layerAdapter, IMatrixDimension... dimension);

    <T> IMatrixIterable<T> iterate(IMatrixLayer<T> layer, IMatrixDimension... dimension);

    String[] toVector();

}