/* * #%L * org.gitools.api * %% * Copyright (C) 2013 - 2016 Universitat Pompeu Fabra - Biomedical Genomics group * %% * This program is free software: you can redistribute it and/or modify * it under the terms of the GNU General Public License as * published by the Free Software Foundation, either version 3 of the * License, or (at your option) any later version. * * This program is distributed in the hope that it will be useful, * but WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the * GNU General Public License for more details. * * You should have received a copy of the GNU General Public * License along with this program. If not, see * <http://www.gnu.org/licenses/gpl-3.0.html>. * #L% */ package org.gitools.api.matrix; import java.util.LinkedHashMap; import java.util.Map; public abstract class ConfigurableTransformFunction extends TransformFunction { Map<String, IFunctionParameter> functionParameters; public ConfigurableTransformFunction(String name) { this(name, ""); } public abstract <T extends ConfigurableTransformFunction> T createNew(); public Map<String, IFunctionParameter> getParameters() { if (functionParameters == null) { functionParameters = new LinkedHashMap<>(); } return functionParameters; } public ConfigurableTransformFunction(String name, String description) { super(name, description); createDefaultParameters(); } public void addParameter(String name, IFunctionParameter parameter) { if (functionParameters == null) { functionParameters = new LinkedHashMap<>(); } functionParameters.put(name, parameter); } public IFunctionParameter getParameter(String key){ if(functionParameters == null) { return null; } return functionParameters.get(key); } protected abstract void createDefaultParameters(); public int getParamterCount() { return getParameters().size(); } public boolean validate() { for (IFunctionParameter parameter : getParameters().values()) { if (!parameter.validate()) { return false; } } return true; } }