/*
* #%L
* gitools-ui-app
* %%
* Copyright (C) 2013 Universitat Pompeu Fabra - Biomedical Genomics group
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of the
* License, or (at your option) any later version.
*
* This program is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU General Public License for more details.
*
* You should have received a copy of the GNU General Public
* License along with this program. If not, see
* <http://www.gnu.org/licenses/gpl-3.0.html>.
* #L%
*/
package org.gitools.ui.core.commands;
import org.gitools.api.analysis.IProgressMonitor;
import org.gitools.api.matrix.MatrixDimensionKey;
import org.gitools.api.matrix.SortDirection;
import org.gitools.heatmap.HeatmapDimension;
import org.gitools.heatmap.MatrixViewSorter;
public abstract class HeaderCommand extends HeatmapCommand {
protected final MatrixDimensionKey dimension;
protected final String COLUMNS = "COLUMNS";
protected final String ROWS = "ROWS";
protected HeatmapDimension heatmapDimension;
protected SortDirection sort;
protected String pattern;
public HeaderCommand(String heatmap, MatrixDimensionKey dimension, String sort, String pattern) {
super(heatmap);
this.dimension = dimension;
this.pattern = pattern;
if (sort != null) {
if (sort.toLowerCase().contains("asc")) {
this.sort = SortDirection.ASCENDING;
} else if (sort.toLowerCase().contains("desc")) {
this.sort = SortDirection.DESCENDING;
}
}
}
@Override
public void execute(IProgressMonitor monitor) throws CommandException {
super.execute(monitor);
heatmapDimension = heatmap.getDimension(dimension);
return;
}
protected void applySort() {
if (sort != null) {
MatrixViewSorter.sortByLabel(heatmap, heatmapDimension.getId().equals(MatrixDimensionKey.ROWS), pattern, sort,
false, heatmapDimension.getId().equals(MatrixDimensionKey.COLUMNS), pattern, sort, false);
}
}
}