/*
* #%L
* gitools-core
* %%
* Copyright (C) 2013 Universitat Pompeu Fabra - Biomedical Genomics group
* %%
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as
* published by the Free Software Foundation, either version 3 of the
* License, or (at your option) any later version.
*
* This program is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU General Public License for more details.
*
* You should have received a copy of the GNU General Public
* License along with this program. If not, see
* <http://www.gnu.org/licenses/gpl-3.0.html>.
* #L%
*/
package org.gitools.analysis.stats.calc;
import com.google.common.collect.Lists;
import java.util.ArrayList;
import java.util.Collections;
import java.util.List;
import static com.google.common.base.Predicates.notNull;
import static com.google.common.collect.Iterables.filter;
public class MedianStatistic implements Statistic {
@Override
public String getName() {
return "median";
}
@Override
public Double calc(Iterable<Double> input) {
List<Double> values = Lists.newArrayList(filter(input, notNull()));
if (values.isEmpty()) {
return null;
}
Collections.sort(values);
final int middle = values.size() / 2;
Double median = values.get(middle);
if (values.size() % 2 == 0) {
median = (values.get(middle - 1) + median) / 2.0;
}
return median;
}
}