package fr.ens.biologie.genomique.eoulsan.translator;
import static org.junit.Assert.assertEquals;
import static org.junit.Assert.assertNull;
import static org.junit.Assert.assertTrue;
import java.util.List;
import org.junit.Before;
import org.junit.Test;
import fr.ens.biologie.genomique.eoulsan.translators.ChangeIndexTranslator;
import fr.ens.biologie.genomique.eoulsan.translators.MultiColumnTranslator;
public class ChangeIndexTranslatorTest {
private static final String[] ARRAY_FIELD = {"Col1", "Col2", "Col3", "Col4"};
private static final String[] ARRAY_ROW_ONE = {"A", "1", "A1", "0"};
private static final String[] ARRAY_ROW_TWO = {"B", "2", "B2", "0"};
private static final String[] ARRAY_ROW_THREE = {"C", "3.0", "C3", "0"};
private static final String[] ARRAY_ROW_FOUR = {"D", "4", "D4", "0"};
private static final String[] ARRAY_ROW_FIVE = {"E", "4", "D4"};
MultiColumnTranslator transl = new MultiColumnTranslator(ARRAY_FIELD);
@Before
public void setUp() throws Exception {
transl.addRow(ARRAY_ROW_ONE);
transl.addRow(ARRAY_ROW_TWO);
transl.addRow(ARRAY_ROW_THREE);
transl.addRow(ARRAY_ROW_FOUR);
transl.addRow(ARRAY_ROW_FIVE);
}
@Test
public void testCreateAndIndex() {
try {
new ChangeIndexTranslator(null, null);
assertTrue(false);
} catch (RuntimeException e) {
assertTrue(true);
}
try {
new ChangeIndexTranslator(transl, "unknown");
assertTrue(false);
} catch (RuntimeException e) {
assertTrue(true);
}
ChangeIndexTranslator ChangeIdxTransl =
new ChangeIndexTranslator(transl, "Col3");
List<String> fields = ChangeIdxTransl.getFields();
assertEquals("Col2", fields.get(0));
assertEquals("Col4", fields.get(1));
assertEquals("1", ChangeIdxTransl.translateField("A", "Col2"));
assertEquals("2", ChangeIdxTransl.translateField("B", "Col2"));
assertNull(ChangeIdxTransl.translateField("Col2", "A"));
assertNull(ChangeIdxTransl.translateField("", ""));
}
}