/* * Eoulsan development code * * This code may be freely distributed and modified under the * terms of the GNU Lesser General Public License version 2.1 or * later and CeCILL-C. This should be distributed with the code. * If you do not have a copy, see: * * http://www.gnu.org/licenses/lgpl-2.1.txt * http://www.cecill.info/licences/Licence_CeCILL-C_V1-en.txt * * Copyright for this code is held jointly by the Genomic platform * of the Institut de Biologie de l'École normale supérieure and * the individual authors. These should be listed in @author doc * comments. * * For more information on the Eoulsan project and its aims, * or to join the Eoulsan Google group, visit the home page * at: * * http://outils.genomique.biologie.ens.fr/eoulsan * */ package fr.ens.biologie.genomique.eoulsan.util.hadoop; import static com.google.common.base.Preconditions.checkNotNull; import java.util.HashSet; import java.util.Set; import org.apache.hadoop.mapreduce.Counter; import org.apache.hadoop.mapreduce.Counters; import org.apache.hadoop.mapreduce.TaskInputOutputContext; import com.google.common.collect.Sets; import fr.ens.biologie.genomique.eoulsan.util.Reporter; /** * This class define a Hadoop reporter. * @since 1.0 * @author Laurent Jourdren */ @SuppressWarnings("rawtypes") public class HadoopReporter implements Reporter { private final TaskInputOutputContext context; private final Counters counters; @Override public void incrCounter(final String counterGroup, final String counterName, final long amount) { if (this.context != null) { // Use in mappers and reducers this.context.getCounter(counterGroup, counterName).increment(amount); } else { // Use in other cases this.counters.getGroup(counterGroup).findCounter(counterName) .increment(amount); } } @Override public long getCounterValue(final String counterGroup, final String counterName) { // This method does not works in Hadoop mappers and reducers if (this.context != null) { throw new UnsupportedOperationException(); } return this.counters.findCounter(counterGroup, counterName).getValue(); } @Override public Set<String> getCounterGroups() { // This method does not works in Hadoop mappers and reducers if (this.context != null) { throw new UnsupportedOperationException(); } return Sets.newHashSet(this.counters.getGroupNames()); } @Override public Set<String> getCounterNames(final String group) { // This method does not works in Hadoop mappers and reducers if (this.context != null) { throw new UnsupportedOperationException(); } final Set<String> result = new HashSet<>(); for (Counter c : this.counters.getGroup(group)) { result.add(c.getName()); } return result; } // // Constructors // /** * Constructor. This constructor is used by Hadoop mappers and reducers. * @param context context to use for counter incrementation */ public HadoopReporter(final TaskInputOutputContext context) { checkNotNull(context, "context is null"); this.counters = null; this.context = context; } /** * Constructor. * @param counters counters to use for counter incrementation */ public HadoopReporter(final Counters counters) { checkNotNull(counters, "counters is null"); this.counters = counters; this.context = null; } }