/* * Eoulsan development code * * This code may be freely distributed and modified under the * terms of the GNU Lesser General Public License version 2.1 or * later and CeCILL-C. This should be distributed with the code. * If you do not have a copy, see: * * http://www.gnu.org/licenses/lgpl-2.1.txt * http://www.cecill.info/licences/Licence_CeCILL-C_V1-en.txt * * Copyright for this code is held jointly by the Genomic platform * of the Institut de Biologie de l'École normale supérieure and * the individual authors. These should be listed in @author doc * comments. * * For more information on the Eoulsan project and its aims, * or to join the Eoulsan Google group, visit the home page * at: * * http://outils.genomique.biologie.ens.fr/eoulsan * */ package fr.ens.biologie.genomique.eoulsan.modules; import java.util.Set; import fr.ens.biologie.genomique.eoulsan.EoulsanException; import fr.ens.biologie.genomique.eoulsan.Globals; import fr.ens.biologie.genomique.eoulsan.annotations.LocalOnly; import fr.ens.biologie.genomique.eoulsan.annotations.NoLog; import fr.ens.biologie.genomique.eoulsan.annotations.ReuseModuleInstance; import fr.ens.biologie.genomique.eoulsan.core.InputPorts; import fr.ens.biologie.genomique.eoulsan.core.InputPortsBuilder; import fr.ens.biologie.genomique.eoulsan.core.Modules; import fr.ens.biologie.genomique.eoulsan.core.Parameter; import fr.ens.biologie.genomique.eoulsan.core.StepConfigurationContext; import fr.ens.biologie.genomique.eoulsan.core.TaskContext; import fr.ens.biologie.genomique.eoulsan.core.TaskResult; import fr.ens.biologie.genomique.eoulsan.core.TaskStatus; import fr.ens.biologie.genomique.eoulsan.core.Version; import fr.ens.biologie.genomique.eoulsan.data.DataFormats; /** * This module is a module that always fails. This module is only used for * debugging purpose. * @since 2.0 * @author Laurent Jourdren */ @LocalOnly @ReuseModuleInstance @NoLog public class FailModule extends AbstractModule { public static final String MODULE_NAME = "fail"; private int delay = 0; @Override public String getName() { return MODULE_NAME; } @Override public Version getVersion() { return Globals.APP_VERSION; } @Override public InputPorts getInputPorts() { return InputPortsBuilder.singleInputPort(DataFormats.DUMMY_TXT); } @Override public void configure(final StepConfigurationContext context, final Set<Parameter> stepParameters) throws EoulsanException { for (Parameter p : stepParameters) { switch (p.getName()) { case "delay": this.delay = p.getIntValueGreaterOrEqualsTo(0); break; default: Modules.unknownParameter(context, p); } } // Check delay value if (this.delay < 0) { Modules.invalidConfiguration(context, "Delay cannot be lower than 0: " + this.delay); } } @Override public TaskResult execute(final TaskContext context, final TaskStatus status) { try { Thread.sleep(delay * 1000); } catch (InterruptedException e) { context.getLogger() .warning("Thread.sleep() interrupted: " + e.getMessage()); } return status.createTaskResult( new EoulsanException("Fail of the step required by user")); } }