/* * Eoulsan development code * * This code may be freely distributed and modified under the * terms of the GNU Lesser General Public License version 2.1 or * later and CeCILL-C. This should be distributed with the code. * If you do not have a copy, see: * * http://www.gnu.org/licenses/lgpl-2.1.txt * http://www.cecill.info/licences/Licence_CeCILL-C_V1-en.txt * * Copyright for this code is held jointly by the Genomic platform * of the Institut de Biologie de l'École normale supérieure and * the individual authors. These should be listed in @author doc * comments. * * For more information on the Eoulsan project and its aims, * or to join the Eoulsan Google group, visit the home page * at: * * http://outils.genomique.biologie.ens.fr/eoulsan * */ package fr.ens.biologie.genomique.eoulsan.data.protocols; import java.io.File; import java.io.IOException; import java.io.InputStream; import java.io.OutputStream; import java.util.List; import fr.ens.biologie.genomique.eoulsan.data.DataFile; import fr.ens.biologie.genomique.eoulsan.data.DataFileMetadata; /** * This interface define a protocol. * @since 1.0 * @author Laurent Jourdren */ public interface DataProtocol { /** * Get Protocol name. * @return the name of the protocol */ String getName(); /** * Get the name of the filename that correspond to the source. * @param source the source * @return a String with the filename */ String getSourceFilename(String source); /** * Get the parent source of the source. * @param src source to use * @return a String with the source of the parent or null if there is parent */ DataFile getDataFileParent(DataFile src); /** * Create an InputStream from the source. * @param src source to use * @return an InputStream * @throws IOException if an error occurs while creating the InputStream */ InputStream getData(DataFile src) throws IOException; /** * Create an OutputStream from the source. * @param dest destination to use * @return an OutputStream * @throws IOException if an error occurs while creating the OutputStream */ OutputStream putData(DataFile dest) throws IOException; /** * Create an OutputStream from the source. * @param dest source to use * @param md metadata for the stream to write * @return an OutputStream * @throws IOException if an error occurs while creating the OutputStream */ OutputStream putData(DataFile dest, DataFileMetadata md) throws IOException; /** * Copy data from a source to a destination source * @param src source source * @param dest destination source * @throws IOException if an error occurs while copying data */ void putData(DataFile src, DataFile dest) throws IOException; /** * Test a source exists. * @param src source to use * @param followLink if the source is a symbolic file and followLink is true, * it will check if the symbolic link target exists instead of the * link * @return true if the source exists */ boolean exists(DataFile src, boolean followLink); /** * Create a directory. * @param dir directory to create * @throws IOException if an error occurs while creating the directory */ void mkdir(DataFile dir) throws IOException; /** * Create a directory and its parents if not exists. * @param dir directory to create * @throws IOException if an error occurs while creating the directory */ void mkdirs(DataFile dir) throws IOException; /** * Create a symbolic link. * @param target target file * @param link symbolic link file * @throws IOException if an error occurs while creating the symbolic link */ void symlink(DataFile target, DataFile link) throws IOException; /** * Delete a file. * @param file file to delete * @param recursive recursive deletion * @throws IOException if an error occurs while deleting the file */ void delete(DataFile file, boolean recursive) throws IOException; /** * List a directory. * @param dir directory to list * @return a list of DataFile objects * @throws IOException if an error occurs while listing the directory */ List<DataFile> list(DataFile dir) throws IOException; /** * Rename a file. * @param file the file to rename * @param dest the destination file * @throws IOException if an error occurs while renaming the directory */ void rename(DataFile file, DataFile dest) throws IOException; /** * Get the metadata for the source. * @param src source to use * @return always a metadataObject * @throws IOException if an error occurs while getting metadata */ DataFileMetadata getMetadata(DataFile src) throws IOException; /** * Test if source is readable with this protocol. * @return true if the source is readable */ boolean canRead(); /** * Test if source is writable with this protocol. * @return true if the source is writable */ boolean canWrite(); /** * Test if the mkdir() and mkdirs() methods are available with this protocol. * @return true if mkdir() and mkdirs() are available */ boolean canMkdir(); /** * Test if the symlink() method is available with this protocol. * @return true if symlink() is available */ boolean canSymlink(); /** * Test if the delete() method is available with this protocol. * @return true if delete() is available */ boolean canDelete(); /** * Test if the list() method is available with this protocol. * @return true if list() is available */ boolean canList(); /** * Test if the renameTo() method is available with this protocol. * @return true if renameTo() is available */ boolean canRename(); /** * Get the underlying File object for the DataFile if the protocol allow it. * @return a File object or null if the protocol does not allow it */ File getSourceAsFile(DataFile src); }