/*
* Eoulsan development code
*
* This code may be freely distributed and modified under the
* terms of the GNU Lesser General Public License version 2.1 or
* later and CeCILL-C. This should be distributed with the code.
* If you do not have a copy, see:
*
* http://www.gnu.org/licenses/lgpl-2.1.txt
* http://www.cecill.info/licences/Licence_CeCILL-C_V1-en.txt
*
* Copyright for this code is held jointly by the Genomic platform
* of the Institut de Biologie de l'École normale supérieure and
* the individual authors. These should be listed in @author doc
* comments.
*
* For more information on the Eoulsan project and its aims,
* or to join the Eoulsan Google group, visit the home page
* at:
*
* http://outils.genomique.biologie.ens.fr/eoulsan
*
*/
package fr.ens.biologie.genomique.eoulsan.io;
import java.io.FilterInputStream;
import java.io.IOException;
import java.io.InputStream;
/**
* This filter class allow to count the number of bytes read by an inputStream.
* @since 1.0
* @author Laurent Jourdren
*/
public class ByteCountInputStream extends FilterInputStream {
private long nRead = 0;
private long size = 0;
private long attemptNRead = -1;
//
// InputStream methods
//
@Override
public void close() throws IOException {
this.in.close();
if (this.attemptNRead < 0) {
return;
}
if (this.nRead != this.attemptNRead) {
throw new IOException("Error read "
+ this.nRead + " bytes, attempted: " + this.attemptNRead + " bytes");
}
}
@Override
public int read() throws IOException {
final int c = this.in.read();
if (c >= 0) {
this.nRead++;
}
return c;
}
@Override
public int read(final byte b[], final int off, final int len)
throws IOException {
final int nr = this.in.read(b, off, len);
if (nr > 0) {
this.nRead += nr;
}
return nr;
}
@Override
public int read(final byte b[]) throws IOException {
final int nr = this.in.read(b);
if (nr > 0) {
this.nRead += nr;
}
return nr;
}
@Override
public synchronized void reset() throws IOException {
this.in.reset();
this.nRead = this.size - this.in.available();
}
@Override
public long skip(final long n) throws IOException {
final long nr = this.in.skip(n);
if (nr > 0) {
this.nRead += nr;
}
return nr;
}
//
// Other methods
//
/**
* Get the number of bytes read.
* @return the number of bytes read
*/
public long getBytesRead() {
return this.nRead;
}
//
// Constructor
//
/**
* Public constructor
* @param is inputStream
*/
public ByteCountInputStream(final InputStream is) {
super(is);
try {
this.size = is.available();
} catch (IOException ioe) {
this.size = 0;
}
}
/**
* Public constructor
* @param is inputStream
*/
public ByteCountInputStream(final InputStream is, final long attemptNRead) {
this(is);
this.attemptNRead = attemptNRead;
}
}