/* * Eoulsan development code * * This code may be freely distributed and modified under the * terms of the GNU Lesser General Public License version 2.1 or * later and CeCILL-C. This should be distributed with the code. * If you do not have a copy, see: * * http://www.gnu.org/licenses/lgpl-2.1.txt * http://www.cecill.info/licences/Licence_CeCILL-C_V1-en.txt * * Copyright for this code is held jointly by the Genomic platform * of the Institut de Biologie de l'École normale supérieure and * the individual authors. These should be listed in @author doc * comments. * * For more information on the Eoulsan project and its aims, * or to join the Eoulsan Google group, visit the home page * at: * * http://outils.genomique.biologie.ens.fr/eoulsan * */ package fr.ens.biologie.genomique.eoulsan.core.workflow; import static com.google.common.base.Preconditions.checkState; import java.io.Serializable; import java.util.Set; import com.google.common.base.Strings; import com.google.common.collect.ImmutableMap; import com.google.common.collect.Multimap; import fr.ens.biologie.genomique.eoulsan.EoulsanException; import fr.ens.biologie.genomique.eoulsan.core.InputPort; import fr.ens.biologie.genomique.eoulsan.data.Data; /** * This class define an auto configurable data product. * @author Laurent Jourdren * @since 2.0 */ class DefaultDataProduct implements DataProduct, Serializable { private static final long serialVersionUID = -4521747867897781954L; private static final String DATAPRODUCT_NAME = "autoconf"; private DataProduct dataproduct; @Override public String getName() { return dataproduct == null ? DATAPRODUCT_NAME : this.dataproduct.getName(); } @Override public void configure(final String conf) throws EoulsanException { checkState(dataproduct == null, "configure() has been already called"); final String s = Strings.nullToEmpty(conf).trim().toLowerCase(); switch (s) { case MatchDataProduct.DATAPRODUCT_NAME: this.dataproduct = new MatchDataProduct(); break; case CrossDataProduct.DATAPRODUCT_NAME: case "": this.dataproduct = new CrossDataProduct(); break; default: throw new EoulsanException("Unknown data product method: " + conf); } this.dataproduct.configure(conf); } @Override public Set<ImmutableMap<InputPort, Data>> makeProduct( final StepInputPorts inputPorts, final Multimap<InputPort, Data> inputTokens) { checkState(dataproduct != null, "configure() has not been called"); return this.dataproduct.makeProduct(inputPorts, inputTokens); } }