/*
* Eoulsan development code
*
* This code may be freely distributed and modified under the
* terms of the GNU Lesser General Public License version 2.1 or
* later and CeCILL-C. This should be distributed with the code.
* If you do not have a copy, see:
*
* http://www.gnu.org/licenses/lgpl-2.1.txt
* http://www.cecill.info/licences/Licence_CeCILL-C_V1-en.txt
*
* Copyright for this code is held jointly by the Genomic platform
* of the Institut de Biologie de l'École normale supérieure and
* the individual authors. These should be listed in @author doc
* comments.
*
* For more information on the Eoulsan project and its aims,
* or to join the Eoulsan Google group, visit the home page
* at:
*
* http://outils.genomique.biologie.ens.fr/eoulsan
*
*/
package fr.ens.biologie.genomique.eoulsan.modules;
import fr.ens.biologie.genomique.eoulsan.annotations.LocalOnly;
import fr.ens.biologie.genomique.eoulsan.annotations.ReuseModuleInstance;
import fr.ens.biologie.genomique.eoulsan.data.Data;
import fr.ens.biologie.genomique.eoulsan.design.SampleMetadata;
/**
* This class define a merger module for technical replicates.
* @author Laurent Jourdren
* @since 2.0
*/
@LocalOnly
@ReuseModuleInstance
public class TechnicalReplicateMergerModule extends MergerModule {
public static final String MODULE_NAME = "technicalreplicatemerger";
//
// Protected method
//
@Override
protected String getMapKey(final Data data) {
return data.getMetadata().get(SampleMetadata.REP_TECH_GROUP_KEY);
}
@Override
protected boolean checkForPartDuplicates() {
return false;
}
//
// Module methods
//
@Override
public String getName() {
return MODULE_NAME;
}
}