/*
* Eoulsan development code
*
* This code may be freely distributed and modified under the
* terms of the GNU Lesser General Public License version 2.1 or
* later and CeCILL-C. This should be distributed with the code.
* If you do not have a copy, see:
*
* http://www.gnu.org/licenses/lgpl-2.1.txt
* http://www.cecill.info/licences/Licence_CeCILL-C_V1-en.txt
*
* Copyright for this code is held jointly by the Genomic platform
* of the Institut de Biologie de l'École normale supérieure and
* the individual authors. These should be listed in @author doc
* comments.
*
* For more information on the Eoulsan project and its aims,
* or to join the Eoulsan Google group, visit the home page
* at:
*
* http://outils.genomique.biologie.ens.fr/eoulsan
*
*/
package fr.ens.biologie.genomique.eoulsan.data.protocols;
import java.io.File;
import java.io.IOException;
import java.io.OutputStream;
import java.util.List;
import fr.ens.biologie.genomique.eoulsan.data.DataFile;
import fr.ens.biologie.genomique.eoulsan.data.DataFileMetadata;
import fr.ens.biologie.genomique.eoulsan.util.FileUtils;
/**
* This class is an abstract Protocol class that implements generic
* getIn/OutputStream with length.
* @since 1.0
* @author Laurent Jourdren
*/
abstract class AbstractDataProtocol implements DataProtocol {
@Override
public String getSourceFilename(final String source) {
final int lastSlashPos = source.lastIndexOf(DataFile.separatorChar);
if (lastSlashPos == -1) {
return source;
}
return source.substring(lastSlashPos + 1);
}
@Override
public DataFile getDataFileParent(final DataFile src) {
if (src == null) {
return null;
}
final String source = src.getSource();
final int nameLen = src.getName().length();
final int sourceLen = source.length();
final int parentSrcLen = sourceLen - nameLen - 1;
return new DataFile(
source.substring(0, parentSrcLen < 0 ? 0 : parentSrcLen));
}
@Override
public OutputStream putData(final DataFile src, final DataFileMetadata md)
throws IOException {
if (!canWrite()) {
throw new IOException("Writing is not allowed for the source: " + src);
}
return putData(src);
}
@Override
public void putData(final DataFile src, final DataFile dest)
throws IOException {
if (src == null) {
throw new NullPointerException("The source of the data to put is null");
}
if (dest == null) {
throw new NullPointerException(
"The destination of the data to put is null");
}
final DataFileMetadata mdSrc = src.getMetaData();
FileUtils.copy(src.getProtocol().getData(src),
dest.getProtocol().putData(dest, mdSrc));
}
@Override
public File getSourceAsFile(final DataFile src) {
if (src == null || src.getSource() == null) {
throw new NullPointerException("The source is null.");
}
return null;
}
@Override
public void mkdir(final DataFile dir) throws IOException {
throw new IOException("The mkdir() method is not supported by the "
+ getName() + " protocol");
}
@Override
public void mkdirs(final DataFile dir) throws IOException {
throw new IOException("The mkdir() method is not supported by the "
+ getName() + " protocol");
}
@Override
public boolean canMkdir() {
return false;
}
@Override
public void symlink(final DataFile target, final DataFile link)
throws IOException {
throw new IOException("The symlink() method is not supported by the "
+ getName() + " protocol");
}
@Override
public boolean canSymlink() {
return false;
}
@Override
public void delete(final DataFile file, final boolean recursive)
throws IOException {
throw new IOException("The delete() method is not supported by the "
+ getName() + " protocol");
}
@Override
public boolean canDelete() {
return false;
}
@Override
public List<DataFile> list(final DataFile file) throws IOException {
throw new IOException(
"The list() method is not supported by the " + getName() + " protocol");
}
@Override
public boolean canList() {
return false;
}
@Override
public boolean canRename() {
return false;
}
@Override
public void rename(final DataFile oldName, final DataFile newName)
throws IOException {
throw new IOException("The rename() method is not supported by the "
+ getName() + " protocol");
}
}