/* * Eoulsan development code * * This code may be freely distributed and modified under the * terms of the GNU Lesser General Public License version 2.1 or * later and CeCILL-C. This should be distributed with the code. * If you do not have a copy, see: * * http://www.gnu.org/licenses/lgpl-2.1.txt * http://www.cecill.info/licences/Licence_CeCILL-C_V1-en.txt * * Copyright for this code is held jointly by the Genomic platform * of the Institut de Biologie de l'École normale supérieure and * the individual authors. These should be listed in @author doc * comments. * * For more information on the Eoulsan project and its aims, * or to join the Eoulsan Google group, visit the home page * at: * * http://outils.genomique.biologie.ens.fr/eoulsan * */ package fr.ens.biologie.genomique.eoulsan.core.workflow; import static com.google.common.base.Preconditions.checkNotNull; import java.io.Serializable; import java.util.ArrayList; import java.util.HashSet; import java.util.List; import java.util.Set; import com.google.common.collect.ImmutableMap; import com.google.common.collect.Lists; import com.google.common.collect.Multimap; import com.google.common.collect.Sets; import fr.ens.biologie.genomique.eoulsan.core.InputPort; import fr.ens.biologie.genomique.eoulsan.data.Data; /** * This class define a cross data product. * @author Laurent Jourdren * @since 2.0 */ class CrossDataProduct implements DataProduct, Serializable { private static final long serialVersionUID = 5268549880105535524L; public static final String DATAPRODUCT_NAME = "cross"; @Override public String getName() { return DATAPRODUCT_NAME; } /** * Class needed for cartesian product computation. */ private static class CartesianProductEntry { final StepInputPort port; final Data data; CartesianProductEntry(final StepInputPort port, final Data data) { this.port = port; this.data = data; } } @Override public void configure(final String conf) { // Nothing to do } @Override public Set<ImmutableMap<InputPort, Data>> makeProduct( final StepInputPorts inputPorts, final Multimap<InputPort, Data> inputTokens) { checkNotNull(inputPorts, "inputPorts argument cannot be null"); checkNotNull(inputTokens, "inputTokens argument cannot be null"); final Set<ImmutableMap<InputPort, Data>> result = new HashSet<>(); final List<StepInputPort> portsList = Lists.newArrayList(inputPorts.iterator()); // First create the lists for Sets.cartesianProduct() final List<Set<CartesianProductEntry>> sets = new ArrayList<>(); for (StepInputPort port : portsList) { final Set<CartesianProductEntry> s = new HashSet<>(); for (Data d : inputTokens.get(port)) { s.add(new CartesianProductEntry(port, d)); } sets.add(s); } // Compute cartesian product final Set<List<CartesianProductEntry>> cartesianProduct = Sets.cartesianProduct(sets); // Now convert result of cartesianProduct() to final result for (List<CartesianProductEntry> l : cartesianProduct) { final ImmutableMap.Builder<InputPort, Data> imb = ImmutableMap.builder(); for (CartesianProductEntry e : l) { imb.put(e.port, e.data); } result.add(imb.build()); } return result; } }