/******************************************************************************* * Copyright (c) 2010 Haifeng Li * * Licensed under the Apache License, Version 2.0 (the "License"); * you may not use this file except in compliance with the License. * You may obtain a copy of the License at * * http://www.apache.org/licenses/LICENSE-2.0 * * Unless required by applicable law or agreed to in writing, software * distributed under the License is distributed on an "AS IS" BASIS, * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. * See the License for the specific language governing permissions and * limitations under the License. *******************************************************************************/ package smile.validation; /** * The false discovery rate (FDR) is ratio of false positives * to combined true and false positives, which is actually 1 - precision. * <p> * FDR = FP / (TP + FP) * * @author Haifeng Li */ public class FDR implements ClassificationMeasure { @Override public double measure(int[] truth, int[] prediction) { if (truth.length != prediction.length) { throw new IllegalArgumentException(String.format("The vector sizes don't match: %d != %d.", truth.length, prediction.length)); } int fp = 0; int p = 0; for (int i = 0; i < truth.length; i++) { if (prediction[i] == 1) { p++; if (truth[i] != 1) { fp++; } } } return (double) fp / p; } @Override public String toString() { return "False Discovery Rate"; } }