/* * TreePriorType.java * * Copyright (c) 2002-2015 Alexei Drummond, Andrew Rambaut and Marc Suchard * * This file is part of BEAST. * See the NOTICE file distributed with this work for additional * information regarding copyright ownership and licensing. * * BEAST is free software; you can redistribute it and/or modify * it under the terms of the GNU Lesser General Public License as * published by the Free Software Foundation; either version 2 * of the License, or (at your option) any later version. * * BEAST is distributed in the hope that it will be useful, * but WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the * GNU Lesser General Public License for more details. * * You should have received a copy of the GNU Lesser General Public * License along with BEAST; if not, write to the * Free Software Foundation, Inc., 51 Franklin St, Fifth Floor, * Boston, MA 02110-1301 USA */ package dr.app.beauti.types; /** * @author Alexei Drummond */ public enum TreePriorType { CONSTANT("Coalescent: Constant Size"), EXPONENTIAL("Coalescent: Exponential Growth"), LOGISTIC("Coalescent: Logistic Growth"), EXPANSION("Coalescent: Expansion Growth"), SKYGRID("Coalescent: Bayesian SkyGrid"), GMRF_SKYRIDE("Coalescent: GMRF Bayesian Skyride"), SKYLINE("Coalescent: Bayesian Skyline"), EXTENDED_SKYLINE("Coalescent: Extended Bayesian Skyline Plot"), YULE("Speciation: Yule Process"), YULE_CALIBRATION("Speciation: Calibrated Yule"), BIRTH_DEATH("Speciation: Birth-Death Process"), BIRTH_DEATH_INCOMPLETE_SAMPLING("Speciation: Birth-Death Incomplete Sampling"), BIRTH_DEATH_SERIAL_SAMPLING("Speciation: Birth-Death Serially Sampled"), BIRTH_DEATH_BASIC_REPRODUCTIVE_NUMBER("Epidemiology: Birth-Death Basic Reproductive Number"), SPECIES_YULE("Species Tree: Yule Process"), SPECIES_YULE_CALIBRATION("Species Tree: Calibrated Yule"), SPECIES_BIRTH_DEATH("Species Tree: Birth-Death Process"); TreePriorType(String name) { this.name = name; } public String toString() { return name; } private final String name; }