ProteinDomainDTO.java

package org.molgenis.mutation.dto;

import java.io.Serializable;
import java.util.List;

public class ProteinDomainDTO implements Comparable<ProteinDomainDTO>, Serializable
{
	/* The serial version UID of this class. Needed for serialization. */
	private static final long serialVersionUID = -4365982338471188950L;

	private Integer domainId;
	private String domainName;
	private Integer gdnaStart;
	private Integer gdnaEnd;
	private String orientation;
	private List<ExonDTO> exonDTOList;

	public Integer getDomainId()
	{
		return domainId;
	}

	public void setDomainId(Integer domainId)
	{
		this.domainId = domainId;
	}

	public String getDomainName()
	{
		return domainName;
	}

	public void setDomainName(String domainName)
	{
		this.domainName = domainName;
	}

	public Integer getGdnaStart()
	{
		return gdnaStart;
	}

	public void setGdnaStart(Integer gdnaStart)
	{
		this.gdnaStart = gdnaStart;
	}

	public Integer getGdnaEnd()
	{
		return gdnaEnd;
	}

	public void setGdnaEnd(Integer gdnaEnd)
	{
		this.gdnaEnd = gdnaEnd;
	}

	public String getOrientation()
	{
		return orientation;
	}

	public void setOrientation(String orientation)
	{
		this.orientation = orientation;
	}

	public List<ExonDTO> getExonDTOList()
	{
		return exonDTOList;
	}

	public void setExonDTOList(List<ExonDTO> exonDTOList)
	{
		this.exonDTOList = exonDTOList;
	}
	@Override
	public int compareTo(ProteinDomainDTO proteinDomainDTO)
	{
		if ("F".equals(this.orientation))
		{
			return this.getGdnaStart().compareTo(proteinDomainDTO.getGdnaStart());
		}
		else
		{
			return -1 * this.getGdnaEnd().compareTo(proteinDomainDTO.getGdnaEnd());
		}
	}
}