ExonSearchCriteriaDTO.java

package org.molgenis.mutation.dto;

import java.io.Serializable;
import java.util.ArrayList;
import java.util.List;

import org.apache.commons.lang.StringUtils;

public class ExonSearchCriteriaDTO implements Serializable
{
	/* The serial version UID of this class. Needed for serialization. */
	private static final long serialVersionUID = 2057260719455042747L;
	private Integer cdnaPosition;
	private Integer gdnaPosition;
	private Integer exonId;
	private String position;
	private Integer number;
	private Integer proteinDomainId;
	private Boolean isIntron;
	private String orientation;

	public Integer getCdnaPosition()
	{
		return cdnaPosition;
	}

	public void setCdnaPosition(Integer cdnaPosition)
	{
		this.cdnaPosition = cdnaPosition;
	}

	public Integer getGdnaPosition()
	{
		return gdnaPosition;
	}

	public void setGdnaPosition(Integer gdnaPosition)
	{
		this.gdnaPosition = gdnaPosition;
	}

	public Integer getExonId()
	{
		return exonId;
	}

	public void setExonId(Integer exonId)
	{
		this.exonId = exonId;
	}

	public String getPosition()
	{
		return position;
	}

	public void setPosition(String position)
	{
		this.position = position;
	}

	public Integer getNumber()
	{
		return number;
	}

	public void setNumber(Integer number)
	{
		this.number = number;
	}

	public Integer getProteinDomainId()
	{
		return proteinDomainId;
	}

	public void setProteinDomainId(Integer proteinDomainId)
	{
		this.proteinDomainId = proteinDomainId;
	}

	public Boolean getIsIntron()
	{
		return isIntron;
	}

	public void setIsIntron(Boolean isIntron)
	{
		this.isIntron = isIntron;
	}

	public String getOrientation()
	{
		return orientation;
	}

	public void setOrientation(String orientation)
	{
		this.orientation = orientation;
	}

	public String toString()
	{
		List<String> result = new ArrayList<String>();

		if (this.cdnaPosition != null) result.add("nucleotide number = '" + this.cdnaPosition + "'");
		if (this.gdnaPosition != null) result.add("genomic position = '" + this.gdnaPosition + "'");
		if (this.exonId != null) result.add("id = '" + this.exonId + "'");
		if (this.position != null) result.add("position = '" + this.position + "'");
		if (this.number != null) result.add("number = '" + this.number + "'");
		if (this.proteinDomainId != null) result.add("protein domain = '" + this.proteinDomainId + "'");
		if (this.isIntron != null) result.add("intron? = '" + this.isIntron + "'");

		return StringUtils.join(result, " or ");
	}
}