/*
* Copyright (C) 2011 SeqWare
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation, either version 3 of the License, or
* (at your option) any later version.
*
* This program is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU General Public License for more details.
*
* You should have received a copy of the GNU General Public License
* along with this program. If not, see <http://www.gnu.org/licenses/>.
*/
package net.sourceforge.seqware.webservice.resources.tables;
import java.io.IOException;
import java.util.ArrayList;
import java.util.List;
import net.sf.beanlib.hibernate3.Hibernate3DtoCopier;
import net.sourceforge.seqware.common.business.WorkflowService;
import net.sourceforge.seqware.common.factory.BeanFactory;
import net.sourceforge.seqware.common.model.Registration;
import net.sourceforge.seqware.common.model.Workflow;
import net.sourceforge.seqware.common.model.lists.WorkflowList;
import net.sourceforge.seqware.common.util.Log;
import net.sourceforge.seqware.common.util.xmltools.JaxbObject;
import net.sourceforge.seqware.common.util.xmltools.XmlTools;
import org.restlet.data.Status;
import org.restlet.representation.Representation;
import org.restlet.resource.Get;
import org.restlet.resource.Post;
import org.restlet.resource.ResourceException;
import org.w3c.dom.Document;
import org.xml.sax.SAXException;
/**
* <p>
* WorkflowResource class.
* </p>
*
* @author mtaschuk
* @version $Id: $Id
*/
public class WorkflowResource extends DatabaseResource {
/**
* <p>
* Constructor for WorkflowResource.
* </p>
*/
public WorkflowResource() {
super("Workflows");
}
/**
* <p>
* getXml.
* </p>
*/
@Get
public void getXml() {
authenticate();
WorkflowService ss = BeanFactory.getWorkflowServiceBean();
Document line = null;
if (queryValues.get("id") != null) {
Workflow p = (Workflow) testIfNull(ss.findByID(parseClientInt(queryValues.get("id"))));
line = detachWorkflow(p);
} else if (queryValues.get("name") != null) {
List<Workflow> workflows = (List<Workflow>) testIfNull(ss.findByName(queryValues.get("name")));
if (queryValues.get("version") != null) {
String version = queryValues.get("version").trim();
for (Workflow workflow : workflows) {
if (version.equals(workflow.getVersion())) {
line = detachWorkflow(workflow);
}
}
} else {
line = detachWorkflowList(workflows);
}
} else {
List<Workflow> workflows = ss.list();
line = detachWorkflowList(workflows);
}
getResponse().setEntity(XmlTools.getRepresentation(line));
}
private Document detachWorkflow(Workflow workflow) {
Hibernate3DtoCopier copier = new Hibernate3DtoCopier();
JaxbObject<Workflow> jaxbTool = new JaxbObject<>();
Workflow dto = copier.hibernate2dto(Workflow.class, workflow);
Document line = XmlTools.marshalToDocument(jaxbTool, dto);
return line;
}
private Document detachWorkflowList(List<Workflow> workflows) {
Hibernate3DtoCopier copier = new Hibernate3DtoCopier();
JaxbObject<WorkflowList> jaxbTool = new JaxbObject<>();
WorkflowList eList = new WorkflowList();
eList.setList(new ArrayList());
for (Workflow workflow : workflows) {
Workflow dto = copier.hibernate2dto(Workflow.class, workflow);
eList.add(dto);
}
Document line = XmlTools.marshalToDocument(jaxbTool, eList);
return line;
}
/**
* <p>
* postJaxb.
* </p>
*
* @param entity
* a {@link org.restlet.representation.Representation} object.
*/
@Post("xml")
public void postJaxb(Representation entity) {
authenticate();
try {
JaxbObject<Workflow> jo = new JaxbObject<>();
String text = entity.getText();
Workflow p;
try {
p = (Workflow) XmlTools.unMarshal(jo, new Workflow(), text);
} catch (SAXException ex) {
throw new ResourceException(Status.CLIENT_ERROR_UNPROCESSABLE_ENTITY, ex);
}
if (p.getOwner() != null) {
Registration r = BeanFactory.getRegistrationServiceBean().findByEmailAddress(p.getOwner().getEmailAddress());
if (r != null) {
p.setOwner(r);
} else {
Log.info("Could not be found: owner" + p.getOwner());
}
} else {
p.setOwner(registration);
}
// persist p
WorkflowService ws = BeanFactory.getWorkflowServiceBean();
Integer id = ws.insert(registration, p);
Workflow w = (Workflow) testIfNull(ws.findBySWAccession(id));
Hibernate3DtoCopier copier = new Hibernate3DtoCopier();
Workflow detachedW = copier.hibernate2dto(Workflow.class, w);
Document line = XmlTools.marshalToDocument(jo, detachedW);
getResponse().setEntity(XmlTools.getRepresentation(line));
getResponse().setLocationRef(getRequest().getRootRef() + "/workflows/" + detachedW.getSwAccession());
getResponse().setStatus(Status.SUCCESS_CREATED);
} catch (SecurityException e) {
getResponse().setStatus(Status.CLIENT_ERROR_FORBIDDEN, e);
} catch (IOException e) {
e.printStackTrace();
getResponse().setStatus(Status.CLIENT_ERROR_BAD_REQUEST, e);
} catch (Exception e) {
e.printStackTrace();
getResponse().setStatus(Status.SERVER_ERROR_INTERNAL, e);
}
}
}