WorkflowRun.java

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package io.seqware.webservice.generated.model;

import java.io.Serializable;
import java.sql.Timestamp;
import java.util.Collection;
import java.util.Date;
import javax.persistence.Basic;
import javax.persistence.CascadeType;
import javax.persistence.Column;
import javax.persistence.Entity;
import javax.persistence.FetchType;
import javax.persistence.GeneratedValue;
import javax.persistence.GenerationType;
import javax.persistence.Id;
import javax.persistence.JoinColumn;
import javax.persistence.ManyToMany;
import javax.persistence.ManyToOne;
import javax.persistence.NamedQueries;
import javax.persistence.NamedQuery;
import javax.persistence.OneToMany;
import javax.persistence.Table;
import javax.persistence.Temporal;
import javax.persistence.TemporalType;
import javax.persistence.Version;
import javax.validation.constraints.NotNull;
import javax.validation.constraints.Size;
import javax.xml.bind.annotation.XmlRootElement;
import javax.xml.bind.annotation.XmlTransient;
import org.codehaus.jackson.annotate.JsonIgnore;

/**
 * 
 * @author boconnor
 */
@Entity
@Table(name = "workflow_run")
@XmlRootElement
@NamedQueries({
        @NamedQuery(name = "WorkflowRun.findAll", query = "SELECT w FROM WorkflowRun w"),
        @NamedQuery(name = "WorkflowRun.findByWorkflowRunId", query = "SELECT w FROM WorkflowRun w WHERE w.workflowRunId = :workflowRunId"),
        @NamedQuery(name = "WorkflowRun.findByName", query = "SELECT w FROM WorkflowRun w WHERE w.name = :name"),
        @NamedQuery(name = "WorkflowRun.findByIniFile", query = "SELECT w FROM WorkflowRun w WHERE w.iniFile = :iniFile"),
        @NamedQuery(name = "WorkflowRun.findByCmd", query = "SELECT w FROM WorkflowRun w WHERE w.cmd = :cmd"),
        @NamedQuery(name = "WorkflowRun.findByWorkflowTemplate", query = "SELECT w FROM WorkflowRun w WHERE w.workflowTemplate = :workflowTemplate"),
        @NamedQuery(name = "WorkflowRun.findByDax", query = "SELECT w FROM WorkflowRun w WHERE w.dax = :dax"),
        @NamedQuery(name = "WorkflowRun.findByStatus", query = "SELECT w FROM WorkflowRun w WHERE w.status = :status"),
        @NamedQuery(name = "WorkflowRun.findByStatusCmd", query = "SELECT w FROM WorkflowRun w WHERE w.statusCmd = :statusCmd"),
        @NamedQuery(name = "WorkflowRun.findBySeqwareRevision", query = "SELECT w FROM WorkflowRun w WHERE w.seqwareRevision = :seqwareRevision"),
        @NamedQuery(name = "WorkflowRun.findByHost", query = "SELECT w FROM WorkflowRun w WHERE w.host = :host"),
        @NamedQuery(name = "WorkflowRun.findByCurrentWorkingDir", query = "SELECT w FROM WorkflowRun w WHERE w.currentWorkingDir = :currentWorkingDir"),
        @NamedQuery(name = "WorkflowRun.findByUsername", query = "SELECT w FROM WorkflowRun w WHERE w.username = :username"),
        @NamedQuery(name = "WorkflowRun.findByStderr", query = "SELECT w FROM WorkflowRun w WHERE w.stderr = :stderr"),
        @NamedQuery(name = "WorkflowRun.findByStdout", query = "SELECT w FROM WorkflowRun w WHERE w.stdout = :stdout"),
        @NamedQuery(name = "WorkflowRun.findByCreateTstmp", query = "SELECT w FROM WorkflowRun w WHERE w.createTstmp = :createTstmp"),
        @NamedQuery(name = "WorkflowRun.findByUpdateTstmp", query = "SELECT w FROM WorkflowRun w WHERE w.updateTstmp = :updateTstmp"),
        @NamedQuery(name = "WorkflowRun.findBySwAccession", query = "SELECT w FROM WorkflowRun w WHERE w.swAccession = :swAccession"),
        @NamedQuery(name = "WorkflowRun.findByWorkflowEngine", query = "SELECT w FROM WorkflowRun w WHERE w.workflowEngine = :workflowEngine") })
public class WorkflowRun implements Serializable {
    @ManyToMany(mappedBy = "workflowRunCollection")
    private Collection<File> fileCollection;
    private static final long serialVersionUID = 1L;
    @Id
    @GeneratedValue(strategy = GenerationType.IDENTITY)
    @Basic(optional = false)
    @Column(name = "workflow_run_id")
    private Integer workflowRunId;
    @Size(max = 2147483647)
    @Column(name = "name")
    private String name;
    @Size(max = 2147483647)
    @Column(name = "ini_file")
    private String iniFile;
    @Size(max = 2147483647)
    @Column(name = "cmd")
    private String cmd;
    @Size(max = 2147483647)
    @Column(name = "workflow_template")
    private String workflowTemplate;
    @Size(max = 2147483647)
    @Column(name = "dax")
    private String dax;
    @Size(max = 2147483647)
    @Column(name = "status")
    private String status;
    @Size(max = 2147483647)
    @Column(name = "status_cmd")
    private String statusCmd;
    @Size(max = 2147483647)
    @Column(name = "seqware_revision")
    private String seqwareRevision;
    @Size(max = 2147483647)
    @Column(name = "host")
    private String host;
    @Size(max = 2147483647)
    @Column(name = "current_working_dir")
    private String currentWorkingDir;
    @Size(max = 2147483647)
    @Column(name = "username")
    private String username;
    @Size(max = 2147483647)
    @Column(name = "stderr")
    private String stderr;
    @Size(max = 2147483647)
    @Column(name = "stdout")
    private String stdout;
    @Basic(optional = false)
    @NotNull
    @Column(name = "create_tstmp")
    @Temporal(TemporalType.TIMESTAMP)
    private Date createTstmp;
    @Column(name = "update_tstmp")
    @Version
    private Timestamp updateTstmp;
    @Column(name = "sw_accession", insertable = false, updatable = false)
    private Integer swAccession;
    @Size(max = 2147483647)
    @Column(name = "workflow_engine")
    private String workflowEngine;
    @OneToMany(mappedBy = "workflowRunId", fetch = FetchType.EAGER)
    private Collection<Processing> processingCollection;
    @OneToMany(mappedBy = "ancestorWorkflowRunId", fetch = FetchType.EAGER)
    private Collection<Processing> processingCollection1;
    @JoinColumn(name = "workflow_id", referencedColumnName = "workflow_id")
    @ManyToOne(optional = false)
    private Workflow workflowId;
    @JoinColumn(name = "owner_id", referencedColumnName = "registration_id")
    @ManyToOne
    private Registration ownerId;
    @OneToMany(cascade = CascadeType.ALL, mappedBy = "workflowRunId")
    private Collection<IusWorkflowRuns> iusWorkflowRunsCollection;
    @OneToMany(cascade = CascadeType.ALL, mappedBy = "workflowRunId")
    private Collection<WorkflowRunAttribute> workflowRunAttributeCollection;
    @OneToMany(cascade = CascadeType.ALL, mappedBy = "workflowRunId")
    private Collection<LaneWorkflowRuns> laneWorkflowRunsCollection;
    @OneToMany(cascade = CascadeType.ALL, mappedBy = "workflowRunId")
    private Collection<ShareWorkflowRun> shareWorkflowRunCollection;
    @OneToMany(cascade = CascadeType.ALL, mappedBy = "workflowRunId")
    private Collection<WorkflowRunParam> workflowRunParamCollection;

    public WorkflowRun() {
    }

    public WorkflowRun(Integer workflowRunId) {
        this.workflowRunId = workflowRunId;
    }

    public WorkflowRun(Integer workflowRunId, Date createTstmp) {
        this.workflowRunId = workflowRunId;
        this.createTstmp = createTstmp;
    }

    public Integer getWorkflowRunId() {
        return workflowRunId;
    }

    public void setWorkflowRunId(Integer workflowRunId) {
        this.workflowRunId = workflowRunId;
    }

    public String getName() {
        return name;
    }

    public void setName(String name) {
        this.name = name;
    }

    public String getIniFile() {
        return iniFile;
    }

    public void setIniFile(String iniFile) {
        this.iniFile = iniFile;
    }

    public String getCmd() {
        return cmd;
    }

    public void setCmd(String cmd) {
        this.cmd = cmd;
    }

    public String getWorkflowTemplate() {
        return workflowTemplate;
    }

    public void setWorkflowTemplate(String workflowTemplate) {
        this.workflowTemplate = workflowTemplate;
    }

    public String getDax() {
        return dax;
    }

    public void setDax(String dax) {
        this.dax = dax;
    }

    public String getStatus() {
        return status;
    }

    public void setStatus(String status) {
        this.status = status;
    }

    public String getStatusCmd() {
        return statusCmd;
    }

    public void setStatusCmd(String statusCmd) {
        this.statusCmd = statusCmd;
    }

    public String getSeqwareRevision() {
        return seqwareRevision;
    }

    public void setSeqwareRevision(String seqwareRevision) {
        this.seqwareRevision = seqwareRevision;
    }

    public String getHost() {
        return host;
    }

    public void setHost(String host) {
        this.host = host;
    }

    public String getCurrentWorkingDir() {
        return currentWorkingDir;
    }

    public void setCurrentWorkingDir(String currentWorkingDir) {
        this.currentWorkingDir = currentWorkingDir;
    }

    public String getUsername() {
        return username;
    }

    public void setUsername(String username) {
        this.username = username;
    }

    public String getStderr() {
        return stderr;
    }

    public void setStderr(String stderr) {
        this.stderr = stderr;
    }

    public String getStdout() {
        return stdout;
    }

    public void setStdout(String stdout) {
        this.stdout = stdout;
    }

    public Date getCreateTstmp() {
        return createTstmp;
    }

    public void setCreateTstmp(Date createTstmp) {
        this.createTstmp = createTstmp;
    }

    public Timestamp getUpdateTstmp() {
        return updateTstmp;
    }

    public void setUpdateTstmp(Timestamp updateTstmp) {
        this.updateTstmp = updateTstmp;
    }

    public Integer getSwAccession() {
        return swAccession;
    }

    public void setSwAccession(Integer swAccession) {
        this.swAccession = swAccession;
    }

    public String getWorkflowEngine() {
        return workflowEngine;
    }

    public void setWorkflowEngine(String workflowEngine) {
        this.workflowEngine = workflowEngine;
    }

    // XmlTransient
    public Collection<Processing> getProcessingCollection() {
        return processingCollection;
    }

    public void setProcessingCollection(Collection<Processing> processingCollection) {
        this.processingCollection = processingCollection;
    }

    // XmlTransient
    public Collection<Processing> getProcessingCollection1() {
        return processingCollection1;
    }

    public void setProcessingCollection1(Collection<Processing> processingCollection1) {
        this.processingCollection1 = processingCollection1;
    }

    public Workflow getWorkflowId() {
        return workflowId;
    }

    public void setWorkflowId(Workflow workflowId) {
        this.workflowId = workflowId;
    }

    public Registration getOwnerId() {
        return ownerId;
    }

    public void setOwnerId(Registration ownerId) {
        this.ownerId = ownerId;
    }

    @XmlTransient
    public Collection<IusWorkflowRuns> getIusWorkflowRunsCollection() {
        return iusWorkflowRunsCollection;
    }

    public void setIusWorkflowRunsCollection(Collection<IusWorkflowRuns> iusWorkflowRunsCollection) {
        this.iusWorkflowRunsCollection = iusWorkflowRunsCollection;
    }

    @XmlTransient
    public Collection<WorkflowRunAttribute> getWorkflowRunAttributeCollection() {
        return workflowRunAttributeCollection;
    }

    public void setWorkflowRunAttributeCollection(Collection<WorkflowRunAttribute> workflowRunAttributeCollection) {
        this.workflowRunAttributeCollection = workflowRunAttributeCollection;
    }

    @XmlTransient
    public Collection<LaneWorkflowRuns> getLaneWorkflowRunsCollection() {
        return laneWorkflowRunsCollection;
    }

    public void setLaneWorkflowRunsCollection(Collection<LaneWorkflowRuns> laneWorkflowRunsCollection) {
        this.laneWorkflowRunsCollection = laneWorkflowRunsCollection;
    }

    @XmlTransient
    public Collection<ShareWorkflowRun> getShareWorkflowRunCollection() {
        return shareWorkflowRunCollection;
    }

    public void setShareWorkflowRunCollection(Collection<ShareWorkflowRun> shareWorkflowRunCollection) {
        this.shareWorkflowRunCollection = shareWorkflowRunCollection;
    }

    @XmlTransient
    public Collection<WorkflowRunParam> getWorkflowRunParamCollection() {
        return workflowRunParamCollection;
    }

    public void setWorkflowRunParamCollection(Collection<WorkflowRunParam> workflowRunParamCollection) {
        this.workflowRunParamCollection = workflowRunParamCollection;
    }

    @Override
    public int hashCode() {
        int hash = 0;
        hash += (workflowRunId != null ? workflowRunId.hashCode() : 0);
        return hash;
    }

    @Override
    public boolean equals(Object object) {
        // TODO: Warning - this method won't work in the case the id fields are not set
        if (!(object instanceof WorkflowRun)) {
            return false;
        }
        WorkflowRun other = (WorkflowRun) object;
        if ((this.workflowRunId == null && other.workflowRunId != null)
                || (this.workflowRunId != null && !this.workflowRunId.equals(other.workflowRunId))) {
            return false;
        }
        return true;
    }

    @Override
    public String toString() {
        return "io.seqware.webservice.model.WorkflowRun[ workflowRunId=" + workflowRunId + " ]";
    }

    @XmlTransient
    @JsonIgnore
    public Collection<File> getFileCollection() {
        return fileCollection;
    }

    public void setFileCollection(Collection<File> fileCollection) {
        this.fileCollection = fileCollection;
    }

}