Processing.java

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package io.seqware.webservice.generated.model;

import java.io.Serializable;
import java.sql.Timestamp;
import java.util.Collection;
import java.util.Date;
import javax.persistence.Basic;
import javax.persistence.CascadeType;
import javax.persistence.Column;
import javax.persistence.Entity;
import javax.persistence.GeneratedValue;
import javax.persistence.GenerationType;
import javax.persistence.Id;
import javax.persistence.JoinColumn;
import javax.persistence.ManyToOne;
import javax.persistence.NamedQueries;
import javax.persistence.NamedQuery;
import javax.persistence.OneToMany;
import javax.persistence.Table;
import javax.persistence.Temporal;
import javax.persistence.TemporalType;
import javax.persistence.Version;
import javax.validation.constraints.NotNull;
import javax.validation.constraints.Size;
import javax.xml.bind.Unmarshaller;
import javax.xml.bind.annotation.XmlRootElement;
import javax.xml.bind.annotation.XmlTransient;

/**
 * 
 * @author boconnor
 */
@Entity
@Table(name = "processing")
@XmlRootElement
@NamedQueries({
        @NamedQuery(name = "Processing.findAll", query = "SELECT p FROM Processing p"),
        @NamedQuery(name = "Processing.findByProcessingId", query = "SELECT p FROM Processing p WHERE p.processingId = :processingId"),
        @NamedQuery(name = "Processing.findByAlgorithm", query = "SELECT p FROM Processing p WHERE p.algorithm = :algorithm"),
        @NamedQuery(name = "Processing.findByStatus", query = "SELECT p FROM Processing p WHERE p.status = :status"),
        @NamedQuery(name = "Processing.findByDescription", query = "SELECT p FROM Processing p WHERE p.description = :description"),
        @NamedQuery(name = "Processing.findByUrl", query = "SELECT p FROM Processing p WHERE p.url = :url"),
        @NamedQuery(name = "Processing.findByUrlLabel", query = "SELECT p FROM Processing p WHERE p.urlLabel = :urlLabel"),
        @NamedQuery(name = "Processing.findByVersion", query = "SELECT p FROM Processing p WHERE p.version = :version"),
        @NamedQuery(name = "Processing.findByParameters", query = "SELECT p FROM Processing p WHERE p.parameters = :parameters"),
        @NamedQuery(name = "Processing.findByStdout", query = "SELECT p FROM Processing p WHERE p.stdout = :stdout"),
        @NamedQuery(name = "Processing.findByStderr", query = "SELECT p FROM Processing p WHERE p.stderr = :stderr"),
        @NamedQuery(name = "Processing.findByExitStatus", query = "SELECT p FROM Processing p WHERE p.exitStatus = :exitStatus"),
        @NamedQuery(name = "Processing.findByProcessExitStatus", query = "SELECT p FROM Processing p WHERE p.processExitStatus = :processExitStatus"),
        @NamedQuery(name = "Processing.findByTaskGroup", query = "SELECT p FROM Processing p WHERE p.taskGroup = :taskGroup"),
        @NamedQuery(name = "Processing.findBySwAccession", query = "SELECT p FROM Processing p WHERE p.swAccession = :swAccession"),
        @NamedQuery(name = "Processing.findByRunStartTstmp", query = "SELECT p FROM Processing p WHERE p.runStartTstmp = :runStartTstmp"),
        @NamedQuery(name = "Processing.findByRunStopTstmp", query = "SELECT p FROM Processing p WHERE p.runStopTstmp = :runStopTstmp"),
        @NamedQuery(name = "Processing.findByCreateTstmp", query = "SELECT p FROM Processing p WHERE p.createTstmp = :createTstmp"),
        @NamedQuery(name = "Processing.findByUpdateTstmp", query = "SELECT p FROM Processing p WHERE p.updateTstmp = :updateTstmp") })
public class Processing implements Serializable {
    private static final long serialVersionUID = 1L;
    @Id
    @GeneratedValue(strategy = GenerationType.IDENTITY)
    @Basic(optional = false)
    @Column(name = "processing_id")
    private Integer processingId;
    @Size(max = 2147483647)
    @Column(name = "algorithm")
    private String algorithm;
    @Size(max = 2147483647)
    @Column(name = "status")
    private String status;
    @Size(max = 2147483647)
    @Column(name = "description")
    private String description;
    @Size(max = 2147483647)
    @Column(name = "url")
    private String url;
    @Size(max = 2147483647)
    @Column(name = "url_label")
    private String urlLabel;
    @Size(max = 2147483647)
    @Column(name = "version")
    private String version;
    @Size(max = 2147483647)
    @Column(name = "parameters")
    private String parameters;
    @Size(max = 2147483647)
    @Column(name = "stdout")
    private String stdout;
    @Size(max = 2147483647)
    @Column(name = "stderr")
    private String stderr;
    @Column(name = "exit_status")
    private Integer exitStatus;
    @Column(name = "process_exit_status")
    private Integer processExitStatus;
    @Column(name = "task_group")
    private Boolean taskGroup;
    @Column(name = "sw_accession", insertable = false, updatable = false)
    private Integer swAccession;
    @Column(name = "run_start_tstmp")
    @Temporal(TemporalType.TIMESTAMP)
    private Date runStartTstmp;
    @Column(name = "run_stop_tstmp")
    @Temporal(TemporalType.TIMESTAMP)
    private Date runStopTstmp;
    @Basic(optional = false)
    @NotNull
    @Column(name = "create_tstmp")
    @Temporal(TemporalType.TIMESTAMP)
    private Date createTstmp;
    @Column(name = "update_tstmp")
    @Version
    private Timestamp updateTstmp;
    @OneToMany(cascade = CascadeType.ALL, mappedBy = "processingId")
    private Collection<ProcessingAttribute> processingAttributeCollection;
    @JoinColumn(name = "workflow_run_id", referencedColumnName = "workflow_run_id")
    @ManyToOne
    private WorkflowRun workflowRunId;
    @JoinColumn(name = "ancestor_workflow_run_id", referencedColumnName = "workflow_run_id")
    @ManyToOne
    private WorkflowRun ancestorWorkflowRunId;
    @JoinColumn(name = "owner_id", referencedColumnName = "registration_id")
    @ManyToOne
    private Registration ownerId;
    @OneToMany(cascade = CascadeType.ALL, mappedBy = "processingId")
    private Collection<ProcessingLanes> processingLanesCollection;
    @OneToMany(cascade = CascadeType.ALL, mappedBy = "processingId")
    private Collection<ProcessingExperiments> processingExperimentsCollection;
    @OneToMany(cascade = CascadeType.ALL, mappedBy = "processingId")
    private Collection<ProcessingSequencerRuns> processingSequencerRunsCollection;
    @OneToMany(cascade = CascadeType.ALL, mappedBy = "processingId")
    private Collection<ProcessingSamples> processingSamplesCollection;
    @OneToMany(cascade = CascadeType.ALL, mappedBy = "processingId")
    private Collection<ProcessingIus> processingIusCollection;
    @OneToMany(mappedBy = "parentId")
    private Collection<ProcessingRelationship> processingRelationshipCollection;
    @OneToMany(mappedBy = "childId")
    private Collection<ProcessingRelationship> processingRelationshipCollection1;
    @OneToMany(cascade = CascadeType.ALL, mappedBy = "processingId")
    private Collection<ProcessingStudies> processingStudiesCollection;
    @OneToMany(cascade = CascadeType.ALL, mappedBy = "processingId")
    private Collection<ProcessingFiles> processingFilesCollection;

    public Processing() {
    }

    public Processing(Integer processingId) {
        this.processingId = processingId;
    }

    public Processing(Integer processingId, Date createTstmp) {
        this.processingId = processingId;
        this.createTstmp = createTstmp;
    }

    public Integer getProcessingId() {
        return processingId;
    }

    public void setProcessingId(Integer processingId) {
        this.processingId = processingId;
    }

    public String getAlgorithm() {
        return algorithm;
    }

    public void setAlgorithm(String algorithm) {
        this.algorithm = algorithm;
    }

    public String getStatus() {
        return status;
    }

    public void setStatus(String status) {
        this.status = status;
    }

    public String getDescription() {
        return description;
    }

    public void setDescription(String description) {
        this.description = description;
    }

    public String getUrl() {
        return url;
    }

    public void setUrl(String url) {
        this.url = url;
    }

    public String getUrlLabel() {
        return urlLabel;
    }

    public void setUrlLabel(String urlLabel) {
        this.urlLabel = urlLabel;
    }

    public String getVersion() {
        return version;
    }

    public void setVersion(String version) {
        this.version = version;
    }

    public String getParameters() {
        return parameters;
    }

    public void setParameters(String parameters) {
        this.parameters = parameters;
    }

    public String getStdout() {
        return stdout;
    }

    public void setStdout(String stdout) {
        this.stdout = stdout;
    }

    public String getStderr() {
        return stderr;
    }

    public void setStderr(String stderr) {
        this.stderr = stderr;
    }

    public Integer getExitStatus() {
        return exitStatus;
    }

    public void setExitStatus(Integer exitStatus) {
        this.exitStatus = exitStatus;
    }

    public Integer getProcessExitStatus() {
        return processExitStatus;
    }

    public void setProcessExitStatus(Integer processExitStatus) {
        this.processExitStatus = processExitStatus;
    }

    public Boolean getTaskGroup() {
        return taskGroup;
    }

    public void setTaskGroup(Boolean taskGroup) {
        this.taskGroup = taskGroup;
    }

    public Integer getSwAccession() {
        return swAccession;
    }

    public void setSwAccession(Integer swAccession) {
        this.swAccession = swAccession;
    }

    public Date getRunStartTstmp() {
        return runStartTstmp;
    }

    public void setRunStartTstmp(Date runStartTstmp) {
        this.runStartTstmp = runStartTstmp;
    }

    public Date getRunStopTstmp() {
        return runStopTstmp;
    }

    public void setRunStopTstmp(Date runStopTstmp) {
        this.runStopTstmp = runStopTstmp;
    }

    public Date getCreateTstmp() {
        return createTstmp;
    }

    public void setCreateTstmp(Date createTstmp) {
        this.createTstmp = createTstmp;
    }

    public Timestamp getUpdateTstmp() {
        return updateTstmp;
    }

    public void setUpdateTstmp(Timestamp updateTstmp) {
        this.updateTstmp = updateTstmp;
    }

    @XmlTransient
    public Collection<ProcessingAttribute> getProcessingAttributeCollection() {
        return processingAttributeCollection;
    }

    public void setProcessingAttributeCollection(Collection<ProcessingAttribute> processingAttributeCollection) {
        this.processingAttributeCollection = processingAttributeCollection;
    }

    @XmlTransient
    public WorkflowRun getWorkflowRunId() {
        return workflowRunId;
    }

    public void afterUnmarshal(Unmarshaller u, Object parent) {
        this.workflowRunId = (WorkflowRun) parent;
    }

    public void setWorkflowRunId(WorkflowRun workflowRunId) {
        this.workflowRunId = workflowRunId;
    }

    @XmlTransient
    public WorkflowRun getAncestorWorkflowRunId() {
        return ancestorWorkflowRunId;
    }

    public void setAncestorWorkflowRunId(WorkflowRun ancestorWorkflowRunId) {
        this.ancestorWorkflowRunId = ancestorWorkflowRunId;
    }

    public Registration getOwnerId() {
        return ownerId;
    }

    public void setOwnerId(Registration ownerId) {
        this.ownerId = ownerId;
    }

    @XmlTransient
    public Collection<ProcessingLanes> getProcessingLanesCollection() {
        return processingLanesCollection;
    }

    public void setProcessingLanesCollection(Collection<ProcessingLanes> processingLanesCollection) {
        this.processingLanesCollection = processingLanesCollection;
    }

    @XmlTransient
    public Collection<ProcessingExperiments> getProcessingExperimentsCollection() {
        return processingExperimentsCollection;
    }

    public void setProcessingExperimentsCollection(Collection<ProcessingExperiments> processingExperimentsCollection) {
        this.processingExperimentsCollection = processingExperimentsCollection;
    }

    @XmlTransient
    public Collection<ProcessingSequencerRuns> getProcessingSequencerRunsCollection() {
        return processingSequencerRunsCollection;
    }

    public void setProcessingSequencerRunsCollection(Collection<ProcessingSequencerRuns> processingSequencerRunsCollection) {
        this.processingSequencerRunsCollection = processingSequencerRunsCollection;
    }

    @XmlTransient
    public Collection<ProcessingSamples> getProcessingSamplesCollection() {
        return processingSamplesCollection;
    }

    public void setProcessingSamplesCollection(Collection<ProcessingSamples> processingSamplesCollection) {
        this.processingSamplesCollection = processingSamplesCollection;
    }

    @XmlTransient
    public Collection<ProcessingIus> getProcessingIusCollection() {
        return processingIusCollection;
    }

    public void setProcessingIusCollection(Collection<ProcessingIus> processingIusCollection) {
        this.processingIusCollection = processingIusCollection;
    }

    @XmlTransient
    public Collection<ProcessingRelationship> getProcessingRelationshipCollection() {
        return processingRelationshipCollection;
    }

    public void setProcessingRelationshipCollection(Collection<ProcessingRelationship> processingRelationshipCollection) {
        this.processingRelationshipCollection = processingRelationshipCollection;
    }

    @XmlTransient
    public Collection<ProcessingRelationship> getProcessingRelationshipCollection1() {
        return processingRelationshipCollection1;
    }

    public void setProcessingRelationshipCollection1(Collection<ProcessingRelationship> processingRelationshipCollection1) {
        this.processingRelationshipCollection1 = processingRelationshipCollection1;
    }

    @XmlTransient
    public Collection<ProcessingStudies> getProcessingStudiesCollection() {
        return processingStudiesCollection;
    }

    public void setProcessingStudiesCollection(Collection<ProcessingStudies> processingStudiesCollection) {
        this.processingStudiesCollection = processingStudiesCollection;
    }

    public Collection<ProcessingFiles> getProcessingFilesCollection() {
        return processingFilesCollection;
    }

    public void setProcessingFilesCollection(Collection<ProcessingFiles> processingFilesCollection) {
        this.processingFilesCollection = processingFilesCollection;
    }

    @Override
    public int hashCode() {
        int hash = 0;
        hash += (processingId != null ? processingId.hashCode() : 0);
        return hash;
    }

    @Override
    public boolean equals(Object object) {
        // TODO: Warning - this method won't work in the case the id fields are not set
        if (!(object instanceof Processing)) {
            return false;
        }
        Processing other = (Processing) object;
        if ((this.processingId == null && other.processingId != null)
                || (this.processingId != null && !this.processingId.equals(other.processingId))) {
            return false;
        }
        return true;
    }

    @Override
    public String toString() {
        return "io.seqware.webservice.model.Processing[ processingId=" + processingId + " ]";
    }

}