/* * Copyright (C) 2012 SeqWare * * This program is free software: you can redistribute it and/or modify * it under the terms of the GNU General Public License as published by * the Free Software Foundation, either version 3 of the License, or * (at your option) any later version. * * This program is distributed in the hope that it will be useful, * but WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the * GNU General Public License for more details. * * You should have received a copy of the GNU General Public License * along with this program. If not, see <http://www.gnu.org/licenses/>. */ package net.sourceforge.seqware.common.factory; import java.sql.SQLException; import java.util.Map; import javax.naming.InitialContext; import javax.naming.NamingException; import javax.sql.DataSource; import net.sourceforge.seqware.common.metadata.MetadataDB; import net.sourceforge.seqware.common.metadata.MetadataFactory; import net.sourceforge.seqware.common.util.Log; import net.sourceforge.seqware.common.util.configtools.ConfigTools; /** * <p> * DBAccess class. * </p> * * @author mtaschuk * @version $Id: $Id */ public class DBAccess { private static final ThreadLocal<MetadataDB> METADATA_DB_WRAPPER = new ThreadLocal<>(); public static MetadataDB get() { MetadataDB mdb = METADATA_DB_WRAPPER.get(); if (mdb == null) { mdb = create(); METADATA_DB_WRAPPER.set(mdb); return mdb; } boolean cleanup = true; try { cleanup = mdb.getDb().isClosed(); } catch (SQLException e) { } if (cleanup) { close(); return get(); } else { return mdb; } } private static MetadataDB create() { DataSource ds = null; try { InitialContext initCtx = new InitialContext(); ds = (DataSource) initCtx.lookup("java:comp/env/jdbc/SeqWareMetaDB"); } catch (NamingException ex) { Log.info("Could not lookup database via context", ex); } if (ds != null) { Log.debug("Instantiate MetadataDB via datasource " + ds.getClass()); try { return new MetadataDB(ds); } catch (SQLException e) { throw new RuntimeException(e); } } else { Log.debug("Obtain MetadataDB via MetadataFactory"); Map<String, String> settings = ConfigTools.getSettings(); return MetadataFactory.getDB(settings); } } /** * <p> * close. * </p> */ public static synchronized void close() { MetadataDB mdb = METADATA_DB_WRAPPER.get(); if (mdb != null) { Log.debug(METADATA_DB_WRAPPER.get().toString() + " was closed "); mdb.clean_up(); } METADATA_DB_WRAPPER.remove(); } private DBAccess() { } }