Organism.java

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package io.seqware.webservice.generated.model;

import java.io.Serializable;
import java.util.Collection;
import javax.persistence.Basic;
import javax.persistence.Column;
import javax.persistence.Entity;
import javax.persistence.GeneratedValue;
import javax.persistence.GenerationType;
import javax.persistence.Id;
import javax.persistence.NamedQueries;
import javax.persistence.NamedQuery;
import javax.persistence.OneToMany;
import javax.persistence.Table;
import javax.validation.constraints.NotNull;
import javax.validation.constraints.Size;
import javax.xml.bind.annotation.XmlRootElement;
import javax.xml.bind.annotation.XmlTransient;

/**
 * 
 * @author boconnor
 */
@Entity
@Table(name = "organism")
@XmlRootElement
@NamedQueries({ @NamedQuery(name = "Organism.findAll", query = "SELECT o FROM Organism o"),
        @NamedQuery(name = "Organism.findByOrganismId", query = "SELECT o FROM Organism o WHERE o.organismId = :organismId"),
        @NamedQuery(name = "Organism.findByCode", query = "SELECT o FROM Organism o WHERE o.code = :code"),
        @NamedQuery(name = "Organism.findByName", query = "SELECT o FROM Organism o WHERE o.name = :name"),
        @NamedQuery(name = "Organism.findByAccession", query = "SELECT o FROM Organism o WHERE o.accession = :accession"),
        @NamedQuery(name = "Organism.findByNcbiTaxid", query = "SELECT o FROM Organism o WHERE o.ncbiTaxid = :ncbiTaxid") })
public class Organism implements Serializable {
    private static final long serialVersionUID = 1L;
    @Id
    @GeneratedValue(strategy = GenerationType.IDENTITY)
    @Basic(optional = false)
    @Column(name = "organism_id")
    private Integer organismId;
    @Basic(optional = false)
    @NotNull
    @Size(min = 1, max = 2147483647)
    @Column(name = "code")
    private String code;
    @Size(max = 2147483647)
    @Column(name = "name")
    private String name;
    @Size(max = 2147483647)
    @Column(name = "accession")
    private String accession;
    @Column(name = "ncbi_taxid")
    private Integer ncbiTaxid;
    @OneToMany(mappedBy = "organismId")
    private Collection<Lane> laneCollection;
    @OneToMany(mappedBy = "organismId")
    private Collection<Sample> sampleCollection;

    public Organism() {
    }

    public Organism(Integer organismId) {
        this.organismId = organismId;
    }

    public Organism(Integer organismId, String code) {
        this.organismId = organismId;
        this.code = code;
    }

    public Integer getOrganismId() {
        return organismId;
    }

    public void setOrganismId(Integer organismId) {
        this.organismId = organismId;
    }

    public String getCode() {
        return code;
    }

    public void setCode(String code) {
        this.code = code;
    }

    public String getName() {
        return name;
    }

    public void setName(String name) {
        this.name = name;
    }

    public String getAccession() {
        return accession;
    }

    public void setAccession(String accession) {
        this.accession = accession;
    }

    public Integer getNcbiTaxid() {
        return ncbiTaxid;
    }

    public void setNcbiTaxid(Integer ncbiTaxid) {
        this.ncbiTaxid = ncbiTaxid;
    }

    @XmlTransient
    public Collection<Lane> getLaneCollection() {
        return laneCollection;
    }

    public void setLaneCollection(Collection<Lane> laneCollection) {
        this.laneCollection = laneCollection;
    }

    @XmlTransient
    public Collection<Sample> getSampleCollection() {
        return sampleCollection;
    }

    public void setSampleCollection(Collection<Sample> sampleCollection) {
        this.sampleCollection = sampleCollection;
    }

    @Override
    public int hashCode() {
        int hash = 0;
        hash += (organismId != null ? organismId.hashCode() : 0);
        return hash;
    }

    @Override
    public boolean equals(Object object) {
        // TODO: Warning - this method won't work in the case the id fields are not set
        if (!(object instanceof Organism)) {
            return false;
        }
        Organism other = (Organism) object;
        if ((this.organismId == null && other.organismId != null) || (this.organismId != null && !this.organismId.equals(other.organismId))) {
            return false;
        }
        return true;
    }

    @Override
    public String toString() {
        return "io.seqware.webservice.model.Organism[ organismId=" + organismId + " ]";
    }

}