CosmicXrefURLResolverTest.java

package org.nextprot.api.core.utils.dbxref.resolver;

import org.junit.Assert;
import org.junit.Before;
import org.junit.Test;
import org.nextprot.api.core.domain.DbXref;


public class CosmicXrefURLResolverTest {

    private DefaultDbXrefURLResolver resolver;

    @Before
    public void setup() {

        resolver = new CosmicXrefURLResolver();
    }

    // entry/NX_Q9BXA6/xref.json
    @Test
    public void testResolveCosmicCOSM() throws Exception {

        DbXref xref = DbXrefURLResolverDelegateTest.createDbXref("COSM1172604", "Cosmic", "whatever");

        Assert.assertEquals("http://cancer.sanger.ac.uk/cosmic/mutation/overview?id=1172604", resolver.resolve(xref));
    }

    // entry/NX_?????/xref.json
    @Test
    public void testResolveCosmicCOSS() throws Exception {

        DbXref xref = DbXrefURLResolverDelegateTest.createDbXref("COSS1172604", "Cosmic", "whatever");

        Assert.assertEquals("http://cancer.sanger.ac.uk/cosmic/sample/overview?id=1172604", resolver.resolve(xref));
    }

    @Test
    public void testResolveCosmicBadPrimaryId() throws Exception {

        DbXref xref = DbXrefURLResolverDelegateTest.createDbXref("HCFC1", "Cosmic", "whatever");

        Assert.assertEquals("http://cancer.sanger.ac.uk/cosmic/gene/overview?ln=HCFC1", resolver.resolve(xref));
    }
}