/* * The MIT License * * Copyright (c) 2013 The Broad Institute * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal * in the Software without restriction, including without limitation the rights * to use, copy, modify, merge, publish, distribute, sublicense, and/or sell * copies of the Software, and to permit persons to whom the Software is * furnished to do so, subject to the following conditions: * * The above copyright notice and this permission notice shall be included in * all copies or substantial portions of the Software. * * THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, * FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, * OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN * THE SOFTWARE. */ package htsjdk.tribble.annotation; /** * Enum for strand, which can be encoded as string */ public enum Strand { POSITIVE("+"), NEGATIVE("-"), NONE("!"); // not really sure what we should do for the NONE Enum /** * How we represent the strand information as text */ private String encoding; Strand(String str) { encoding = str; } /** * provide a way to take an encoding string, and produce a Strand * @param encoding the encoding string * @return a Strand object, if an appropriate one cannot be located an IllegalArg exception */ public static Strand toStrand(String encoding) { for (Strand st : Strand.values()) if (st.encoding.equals(encoding)) return st; throw new IllegalArgumentException("Unable to match encoding to Strand enum for encoding string " + encoding); } }