/* * The MIT License * * Copyright (c) 2009 The Broad Institute * * Permission is hereby granted, free of charge, to any person obtaining a copy * of this software and associated documentation files (the "Software"), to deal * in the Software without restriction, including without limitation the rights * to use, copy, modify, merge, publish, distribute, sublicense, and/or sell * copies of the Software, and to permit persons to whom the Software is * furnished to do so, subject to the following conditions: * * The above copyright notice and this permission notice shall be included in * all copies or substantial portions of the Software. * * THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, * FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE * AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER * LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, * OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN * THE SOFTWARE. */ package htsjdk.samtools; /** * One component of a cigar string. The component comprises the operator, and the number of bases to which * the operator applies. */ public class CigarElement { private final int length; private final CigarOperator operator; public CigarElement(final int length, final CigarOperator operator) { this.length = length; this.operator = operator; } public int getLength() { return length; } public CigarOperator getOperator() { return operator; } @Override public boolean equals(final Object o) { if (this == o) return true; if (!(o instanceof CigarElement)) return false; final CigarElement that = (CigarElement) o; if (length != that.length) return false; if (operator != that.operator) return false; return true; } @Override public int hashCode() { int result = length; result = 31 * result + (operator != null ? operator.hashCode() : 0); return result; } }