EIDReportData.java

/**
 * The contents of this file are subject to the Mozilla Public License
 * Version 1.1 (the "License"); you may not use this file except in
 * compliance with the License. You may obtain a copy of the License at
 * http://www.mozilla.org/MPL/
 *
 * Software distributed under the License is distributed on an "AS IS"
 * basis, WITHOUT WARRANTY OF ANY KIND, either express or implied. See the
 * License for the specific language governing rights and limitations under
 * the License.
 *
 * The Original Code is OpenELIS code.
 *
 * Copyright (C) CIRG, University of Washington, Seattle WA.  All Rights Reserved.
 *
 */
package us.mn.state.health.lims.reports.action.implementation.reportBeans;

import java.util.ArrayList;
import java.util.HashMap;
import java.util.List;
import java.util.Map;

import org.apache.commons.validator.GenericValidator;

import us.mn.state.health.lims.common.services.QAService;
import us.mn.state.health.lims.common.services.QAService.QAObservationType;
import us.mn.state.health.lims.qaevent.valueholder.retroCI.QaEventItem;
import us.mn.state.health.lims.sample.valueholder.Sample;
import us.mn.state.health.lims.sampleitem.valueholder.SampleItem;
import us.mn.state.health.lims.sampleqaevent.dao.SampleQaEventDAO;
import us.mn.state.health.lims.sampleqaevent.daoimpl.SampleQaEventDAOImpl;
import us.mn.state.health.lims.sampleqaevent.valueholder.SampleQaEvent;

public class EIDReportData {

	private String hiv_status = "X";
	private String pcr_type = "X";
	private String subjectno;
	private String sitesubjectno;
	private String birth_date;
	private String ageMonth = "--";
	private String ageWeek = "--";
	private String gender;
	private String collectiondate;
	private String receptiondate;
	private String accession_number;
	private String servicename;
	private String doctor;
	private String compleationdate;
	private String subjectNumber;
	private String PTME;
	private String clinicDistrict;
	private String clinic;
	private String status;
	private Boolean duplicateReport = Boolean.FALSE;
	
	private List<SampleQaEvent> sampleQAEventList;
	List<QaEventItem> qaEventItems;
	
	private String allQaEvents=null;
	private String receptionQaEvent=null;
	private String virologyEidQaEvent=null;
	
	private Map<String, String> previousResultMap = new HashMap<String, String>();

	public String getHiv_status() {
		return hiv_status;
	}
	public void setHiv_status(String hivStatus) {
		hiv_status = hivStatus;
	}
	public String getPcr_type() {
		return pcr_type;
	}
	public void setPcr_type(String pcrType) {
		pcr_type = pcrType;
	}

	public String getSubjectno() {
		return subjectno;
	}
	public void setSubjectno(String subjectno) {
		this.subjectno = subjectno;
	}
	public String getSitesubjectno() {
		return sitesubjectno;
	}
	public void setSitesubjectno(String sitesubjectno) {
		this.sitesubjectno = sitesubjectno;
	}
	public String getBirth_date() {
		return birth_date;
	}
	public void setBirth_date(String birthDate) {
		birth_date = birthDate;
	}

	public String getAgeMonth() {
		return ageMonth;
	}
	public void setAgeMonth(String agemonth) {
		this.ageMonth = agemonth;
	}
	public String getAgeWeek() {
		return ageWeek;
	}
	public void setAgeWeek(String ageWeek) {
		this.ageWeek = ageWeek;
	}
	public String getGender() {
		return gender;
	}
	public void setGender(String gender) {
		this.gender = gender;
	}
	public String getCollectiondate() {
		return collectiondate;
	}
	public void setCollectiondate(String collectiondate) {
		this.collectiondate = collectiondate;
	}
	public String getAccession_number() {
		return accession_number;
	}
	public void setAccession_number(String accessionNumber) {
		accession_number = accessionNumber;
	}
	public String getServicename() {
		return servicename;
	}
	public void setServicename(String servicename) {
		this.servicename = servicename;
	}
	public String getDoctor() {
		return doctor;
	}
	public void setDoctor(String doctor) {
		this.doctor = doctor;
	}
	public String getCompleationdate() {
		return compleationdate;
	}
	public void setCompleationdate(String compleationdate) {
		this.compleationdate = compleationdate;
	}
	public void setSubjectNumber(String subjectNumber) {
		this.subjectNumber = subjectNumber;
	}
	public String getSubjectNumber() {
		return subjectNumber;
	}
	public String getPTME() {
		return PTME;
	}
	public void setPTME(String pTME) {
		PTME = pTME;
	}
	public String getClinicDistrict() {
		return clinicDistrict;
	}
	public void setClinicDistrict(String clinicDistrict) {
		this.clinicDistrict = clinicDistrict;
	}
	public String getClinic() {
		return clinic;
	}
	public void setClinic(String clinic) {
		this.clinic = clinic;
	}
	public void setStatus(String status) {
		this.status = status;
	}
	public String getStatus() {
		return status;
	}
	public String getReceptiondate(){
		return receptiondate;
	}
	public void setReceptiondate(String receptiondate){
		this.receptiondate = receptiondate;
	}
	public Boolean getDuplicateReport() {
		return duplicateReport;
	}
	public void setDuplicateReport(Boolean duplicateReport) {
		this.duplicateReport = duplicateReport;
	}
	public String getVirologyEidQaEvent() {
		return virologyEidQaEvent;
	}
	public void setVirologyEidQaEvent(String virologyEidQaEvent) {
		this.virologyEidQaEvent = virologyEidQaEvent;
	}
	public String getAllQaEvents(){
		return allQaEvents;
	}
	public void setAllQaEvents(String  allQaEvents){
		this.allQaEvents=allQaEvents;
	}
	public String getReceptionQaEvent() {
		return receptionQaEvent;
	}
	public void setReceptionQaEvent(String receptionQaEvent) {
		this.receptionQaEvent = receptionQaEvent;
	}
	public Map<String, String>  getPreviousResultMap(){
		return previousResultMap;
	}
	public void setPreviousResultMap(Map<String, String> previousResultMap){
		this.previousResultMap=previousResultMap;
	}
	public void getSampleQaEventItems(Sample sample){
	    qaEventItems = new ArrayList<QaEventItem>();
		if(sample != null){
			getSampleQaEvents(sample);
			for(SampleQaEvent event : sampleQAEventList){
				QAService qa = new QAService(event);
				QaEventItem item = new QaEventItem();
				item.setId(qa.getEventId());
				item.setQaEvent(qa.getQAEvent().getId());
				SampleItem sampleItem = qa.getSampleItem();
                // -1 is the index for "all samples"
				String sampleType=(sampleItem == null) ? "-1" : sampleItem.getTypeOfSample().getNameKey();
				allQaEvents=allQaEvents==null?sampleType+":"+qa.getQAEvent().getNameKey():allQaEvents+";"+sampleType+":"+qa.getQAEvent().getNameKey();
				
				if(!GenericValidator.isBlankOrNull(qa.getObservationValue( QAObservationType.SECTION )) && qa.getObservationValue( QAObservationType.SECTION ).equals("testSection.EID"))
					virologyEidQaEvent=virologyEidQaEvent==null ? qa.getQAEvent().getLocalizedName() : virologyEidQaEvent+" , "+qa.getQAEvent().getLocalizedName();
	
				
			}
		}

	}
	public void getSampleQaEvents(Sample sample){
		SampleQaEventDAO sampleQaEventDAO = new SampleQaEventDAOImpl();
		sampleQAEventList = sampleQaEventDAO.getSampleQaEventsBySample(sample);
	}


}