/* *------------------------------------------------------------------------------ * Copyright (C) 2006 University of Dundee. All rights reserved. * * * This program is free software; you can redistribute it and/or modify * it under the terms of the GNU General Public License as published by * the Free Software Foundation; either version 2 of the License, or * (at your option) any later version. * This program is distributed in the hope that it will be useful, * but WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the * GNU General Public License for more details. * * You should have received a copy of the GNU General Public License along * with this program; if not, write to the Free Software Foundation, Inc., * 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. * *------------------------------------------------------------------------------ */ package org.openmicroscopy.shoola.env.data.views.calls; import java.util.HashMap; import java.util.Iterator; import java.util.List; import java.util.Map; import org.openmicroscopy.shoola.env.data.OmeroImageService; import org.openmicroscopy.shoola.env.data.OmeroMetadataService; import omero.gateway.SecurityContext; import org.openmicroscopy.shoola.env.data.views.BatchCall; import org.openmicroscopy.shoola.env.data.views.BatchCallTree; import org.openmicroscopy.shoola.env.rnd.RndProxyDef; import omero.gateway.model.ChannelData; /** * Command to retrieve the channels medatada. * * @author Jean-Marie Burel      * <a href="mailto:j.burel@dundee.ac.uk">j.burel@dundee.ac.uk</a> * @author Andrea Falconi      * <a href="mailto:a.falconi@dundee.ac.uk">a.falconi@dundee.ac.uk</a> * @author Donald MacDonald      * <a href="mailto:donald@lifesci.dundee.ac.uk">donald@lifesci.dundee.ac.uk</a> * @version 3.0 * @since OME2.2 */ public class ChannelMetadataLoader extends BatchCallTree { /** The result of the query. */ private Object results; /** Loads the specified tree. */ private BatchCall loadCall; /** * Creates a {@link BatchCall} to retrieve the channels metadata. * * @param ctx The security context. * @param pixelsID The ID of the pixels set. * @param userID If the id is specified i.e. not <code>-1</code>, * load the color associated to the channel, * <code>false</code> otherwise. * @return The {@link BatchCall}. */ private BatchCall makeBatchCall(final SecurityContext ctx, final long pixelsID, final long userID) { return new BatchCall("Loading channel Metadata: ") { public void doCall() throws Exception { OmeroMetadataService os = context.getMetadataService(); List l = os.getChannelsMetadata(ctx, pixelsID); if (userID >= 0) { //load the rendering settings. OmeroImageService svc = context.getImageService(); List rnd = svc.getRenderingSettingsFor(ctx, pixelsID, userID); Map channels = new HashMap(); Iterator i = l.iterator(); if (rnd != null && rnd.size() > 0) { RndProxyDef ref = (RndProxyDef) rnd.get(0); ChannelData channel; while (i.hasNext()) { channel = (ChannelData) i.next(); channels.put(channel, ref.getChannelColor(channel.getIndex())); } } else { while (i.hasNext()) channels.put(i.next(), null); } results = channels; } else results = l; } }; } /** * Adds the {@link #loadCall} to the computation tree. * @see BatchCallTree#buildTree() */ protected void buildTree() { add(loadCall); } /** * Returns the root node of the requested tree. * @see BatchCallTree#getResult() */ protected Object getResult() { return results; } /** * Loads the channel metadata linked to pixels set to render. * If bad arguments are passed, we throw a runtime * exception so to fail early and in the caller's thread. * * @param ctx The security context. * @param pixelsID The Id of the pixels set. * @param userID If the id is specified i.e. not <code>-1</code>, * load the color associated to the channel, * <code>false</code> otherwise. */ public ChannelMetadataLoader(SecurityContext ctx, long pixelsID, long userID) { if (pixelsID < 0) throw new IllegalArgumentException("Pixels ID not valid."); loadCall = makeBatchCall(ctx, pixelsID, userID); } }