/** * Copyright (C) 2012-2013 Selventa, Inc. * * This file is part of the OpenBEL Framework. * * This program is free software; you can redistribute it and/or modify it * under the terms of the GNU Lesser General Public License as published by * the Free Software Foundation, either version 3 of the License, or * (at your option) any later version. * * The OpenBEL Framework is distributed in the hope that it will be useful, but * WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY * or FITNESS FOR A PARTICULAR PURPOSE. See the GNU Lesser General Public * License for more details. * * You should have received a copy of the GNU Lesser General Public License * along with the OpenBEL Framework. If not, see <http://www.gnu.org/licenses/>. * * Additional Terms under LGPL v3: * * This license does not authorize you and you are prohibited from using the * name, trademarks, service marks, logos or similar indicia of Selventa, Inc., * or, in the discretion of other licensors or authors of the program, the * name, trademarks, service marks, logos or similar indicia of such authors or * licensors, in any marketing or advertising materials relating to your * distribution of the program or any covered product. This restriction does * not waive or limit your obligation to keep intact all copyright notices set * forth in the program as delivered to you. * * If you distribute the program in whole or in part, or any modified version * of the program, and you assume contractual liability to the recipient with * respect to the program or modified version, then you will indemnify the * authors and licensors of the program for any liabilities that these * contractual assumptions directly impose on those licensors and authors. */ package org.openbel.framework.core.namespace; import static org.junit.Assert.fail; import java.net.URL; import org.junit.After; import org.junit.Before; import org.junit.Ignore; import org.junit.Test; import org.openbel.framework.common.SystemConfigurationFile; import org.openbel.framework.common.cfg.SystemConfigurationBasedTest; import org.openbel.framework.common.model.CommonModelFactory; import org.openbel.framework.common.model.Namespace; import org.openbel.framework.common.model.Parameter; import org.openbel.framework.core.df.cache.CacheLookupService; import org.openbel.framework.core.df.cache.CacheableResourceService; import org.openbel.framework.core.df.cache.DefaultCacheLookupService; import org.openbel.framework.core.df.cache.DefaultCacheableResourceService; import org.openbel.framework.core.indexer.IndexingFailure; import org.openbel.framework.core.namespace.DefaultNamespaceService; import org.openbel.framework.core.namespace.NamespaceIndexerService; import org.openbel.framework.core.namespace.NamespaceIndexerServiceImpl; import org.openbel.framework.core.namespace.NamespaceService; import org.openbel.framework.core.namespace.NamespaceSyntaxWarning; import org.openbel.framework.core.protocol.ResourceDownloadError; /** * NamespaceServiceTest provides a unit-test for the {@link NamespaceService}. * This goal of this unit-test is to validate the namespace operations with a * focus on concurrency. * * @author Anthony Bargnesi {@code <abargnesi@selventa.com>} */ @SystemConfigurationFile(path = "src/test/resources/org/openbel/framework/core/namespace/belframework.cfg") public class DefaultNamespaceServiceTest extends SystemConfigurationBasedTest { private NamespaceService namespaceService; @Before @Override public void setup() { super.setup(); final CacheLookupService cacheLookup = new DefaultCacheLookupService(); final NamespaceIndexerService nsindexer = new NamespaceIndexerServiceImpl(); final CacheableResourceService cacheService = new DefaultCacheableResourceService(); namespaceService = new DefaultNamespaceService( cacheService, cacheLookup, nsindexer); } @After @Override public void teardown() { super.teardown(); } @Test @Ignore public void testVerifyParameter() { URL nsresource = getClass().getResource( "/org/openbel/framework/core/namespace/test.belns"); String nsFileUrl = nsresource.toString(); if (nsFileUrl == null) { fail("Cannot read namespace location: " + nsFileUrl); } final Parameter p = CommonModelFactory.getInstance().createParameter( new Namespace("COMPLEX", nsFileUrl), "Propionyl Coa Carboxylase Complex"); try { namespaceService.verify(p); } catch (NamespaceSyntaxWarning e) { e.printStackTrace(); fail(e.getMessage()); } catch (IndexingFailure e) { e.printStackTrace(); fail(e.getMessage()); } catch (ResourceDownloadError e) { e.printStackTrace(); fail(e.getMessage()); } } }