/** * Copyright (C) 2012-2013 Selventa, Inc. * * This file is part of the OpenBEL Framework. * * This program is free software; you can redistribute it and/or modify it * under the terms of the GNU Lesser General Public License as published by * the Free Software Foundation, either version 3 of the License, or * (at your option) any later version. * * The OpenBEL Framework is distributed in the hope that it will be useful, but * WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY * or FITNESS FOR A PARTICULAR PURPOSE. See the GNU Lesser General Public * License for more details. * * You should have received a copy of the GNU Lesser General Public License * along with the OpenBEL Framework. If not, see <http://www.gnu.org/licenses/>. * * Additional Terms under LGPL v3: * * This license does not authorize you and you are prohibited from using the * name, trademarks, service marks, logos or similar indicia of Selventa, Inc., * or, in the discretion of other licensors or authors of the program, the * name, trademarks, service marks, logos or similar indicia of such authors or * licensors, in any marketing or advertising materials relating to your * distribution of the program or any covered product. This restriction does * not waive or limit your obligation to keep intact all copyright notices set * forth in the program as delivered to you. * * If you distribute the program in whole or in part, or any modified version * of the program, and you assume contractual liability to the recipient with * respect to the program or modified version, then you will indemnify the * authors and licensors of the program for any liabilities that these * contractual assumptions directly impose on those licensors and authors. */ package org.openbel.framework.common.bel.parser; import org.antlr.runtime.ANTLRStringStream; import org.antlr.runtime.CharStream; import org.antlr.runtime.CommonTokenStream; import org.antlr.runtime.RecognitionException; import org.antlr.runtime.TokenStream; public class BELScriptTest { public static void main(String[] args) throws RecognitionException { for (String test : "\"Test\", \"Records\", ,,\"Another\"".split("\\,")) { System.out.println(test.trim()); } CharStream cstream = new ANTLRStringStream("SET BodyPart = {\"lung\" , \"liver\"}"); BELScriptLexer lexer = new BELScriptLexer(cstream); TokenStream tstream = new CommonTokenStream(lexer); BELScriptParser parser = new BELScriptParser(tstream); parser.record(); cstream = new ANTLRStringStream("SET DOCUMENT name = \"Test Document\""); lexer = new BELScriptLexer(cstream); tstream = new CommonTokenStream(lexer); parser = new BELScriptParser(tstream); parser.record(); cstream = new ANTLRStringStream("SET Species = \"9606\""); lexer = new BELScriptLexer(cstream); tstream = new CommonTokenStream(lexer); parser = new BELScriptParser(tstream); parser.record(); cstream = new ANTLRStringStream( "SET records = {{\"lung\", \"liver\"}, {\"tissue1\", \"tissue2\"}}"); lexer = new BELScriptLexer(cstream); tstream = new CommonTokenStream(lexer); parser = new BELScriptParser(tstream); parser.record(); cstream = new ANTLRStringStream("UNSET species"); lexer = new BELScriptLexer(cstream); tstream = new CommonTokenStream(lexer); parser = new BELScriptParser(tstream); parser.record(); cstream = new ANTLRStringStream("UNSET {species ,tissue ,cell}"); lexer = new BELScriptLexer(cstream); tstream = new CommonTokenStream(lexer); parser = new BELScriptParser(tstream); parser.record(); cstream = new ANTLRStringStream("UNSET ALL"); lexer = new BELScriptLexer(cstream); tstream = new CommonTokenStream(lexer); parser = new BELScriptParser(tstream); parser.record(); cstream = new ANTLRStringStream( "DEFINE DEFAULT NAMESPACE EG AS URL \"http://www.entrez-gene.org\""); lexer = new BELScriptLexer(cstream); tstream = new CommonTokenStream(lexer); parser = new BELScriptParser(tstream); parser.record(); cstream = new ANTLRStringStream( "DEFINE ANNOTATION ExposureTime AS PATTERN \"[0-9]+ hours\""); lexer = new BELScriptLexer(cstream); tstream = new CommonTokenStream(lexer); parser = new BELScriptParser(tstream); parser.record(); cstream = new ANTLRStringStream( "DEFINE ANNOTATION Dosage AS LIST {\"low\",\"medium\",\"high\"}"); lexer = new BELScriptLexer(cstream); tstream = new CommonTokenStream(lexer); parser = new BELScriptParser(tstream); parser.record(); cstream = new ANTLRStringStream("# this is a document comment line"); lexer = new BELScriptLexer(cstream); tstream = new CommonTokenStream(lexer); parser = new BELScriptParser(tstream); parser.record(); cstream = new ANTLRStringStream( "proteinAbundance(HGNC:AKT1) increases geneAbundance(EG:208) // Extracted from \\\n associated text."); lexer = new BELScriptLexer(cstream); tstream = new CommonTokenStream(lexer); parser = new BELScriptParser(tstream); parser.statement(); System.out.println("ok"); } }