/** * Copyright (C) 2012-2013 Selventa, Inc. * * This file is part of the OpenBEL Framework. * * This program is free software; you can redistribute it and/or modify it * under the terms of the GNU Lesser General Public License as published by * the Free Software Foundation, either version 3 of the License, or * (at your option) any later version. * * The OpenBEL Framework is distributed in the hope that it will be useful, but * WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY * or FITNESS FOR A PARTICULAR PURPOSE. See the GNU Lesser General Public * License for more details. * * You should have received a copy of the GNU Lesser General Public License * along with the OpenBEL Framework. If not, see <http://www.gnu.org/licenses/>. * * Additional Terms under LGPL v3: * * This license does not authorize you and you are prohibited from using the * name, trademarks, service marks, logos or similar indicia of Selventa, Inc., * or, in the discretion of other licensors or authors of the program, the * name, trademarks, service marks, logos or similar indicia of such authors or * licensors, in any marketing or advertising materials relating to your * distribution of the program or any covered product. This restriction does * not waive or limit your obligation to keep intact all copyright notices set * forth in the program as delivered to you. * * If you distribute the program in whole or in part, or any modified version * of the program, and you assume contractual liability to the recipient with * respect to the program or modified version, then you will indemnify the * authors and licensors of the program for any liabilities that these * contractual assumptions directly impose on those licensors and authors. */ package org.openbel.framework.core.compiler.expansion; import org.openbel.framework.common.model.Document; import org.openbel.framework.common.protonetwork.model.ProtoNetwork; import org.openbel.framework.core.protonetwork.ProtoNetworkBuilder; /** * {@link ExpansionService} defines the mechanism which expands terms and * statements to {@link ProtoNetwork proto network} proto nodes and proto * edges. * * @author Anthony Bargnesi {@code <abargnesi@selventa.com>} */ public interface ExpansionService { /** * Expand terms in the {@link ProtoNetwork proto network} based on a set * of {@link TermExpansionRule term expansion rules}. * * @param doc the original {@link Document document} needed as a dependency * when using {@link ProtoNetworkBuilder proto network builder} * @param pn the {@link ProtoNetwork proto network} * @see TermExpansionRule */ public void expandTerms(final Document doc, final ProtoNetwork pn); /** * Expand statements in the {@link ProtoNetwork proto network} based on a * set of {@link StatementExpansionRule statement expansion rules}. * * @param doc the original {@link Document document} needed as a dependency * when using {@link ProtoNetworkBuilder proto network builder} * @param pn the {@link ProtoNetwork proto network} * @param stmtExpand determines if {@link ProtoNetwork proto network} * statements should be expanded to proto edges by inferring relationships * using the {@link DistributeStatementExpansionRule distributed rule} * @see StatementExpansionRule */ public void expandStatements(final Document doc, final ProtoNetwork pn, final boolean stmtExpand); }